RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 TMEM51Q9NW97 253 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 VPS54Q9P1Q0 977 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 SEC63Q9UGP8 760 aaKnown RBP4.24□□□□□ -1.73
TRAV15-201ENST00000556680 NRBP1Q9UHY1 535 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 HACL1Q9UJ83 578 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 RCOR1Q9UKL0 485 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 NENFQ9UMX5 172 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 KCNJ14Q9UNX9 436 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 CNTNAP1P78357 1384 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 PLIN4Q96Q06 1357 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 A0A0G2JMZ2 1700 aa4.24□□□□□ -1.73
TRAV15-201ENST00000556680 RPS10-NUDT3A0A1W2PQS6 291 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 HCRTR2O43614 444 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 LDB2O43679 373 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 HS6ST1O60243 411 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 GPC4O75487 556 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 GJB3O75712 270 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 BEST1O76090 585 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 DDNO94850 711 aaPredicted RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 OR2C1O95371 312 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 MBD3O95983 291 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 GH2P01242 217 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 EEF2P13639 858 aaKnown RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 FDPSP14324 419 aaKnown RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 SAT1P21673 171 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 CHATP28329 748 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ACSL1P33121 698 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 KRT20P35900 424 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 KRT2P35908 639 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 THPOP40225 353 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 PRELPP51888 382 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 MRPL12P52815 198 aaKnown RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 NAPAP54920 295 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 C21orf58P58505 322 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 STK4Q13043 487 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 IRF3Q14653 427 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ADIPOQQ15848 244 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ETFDHQ16134 617 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 SHROOM1Q2M3G4 852 aaPredicted RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 C2orf68Q2NKX9 166 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ASPRV1Q53RT3 343 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 RAB41Q5JT25 222 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 QSOX2Q6ZRP7 698 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 TMEM179Q6ZVK1 233 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 PIP4P1Q86T03 277 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 APOBEC3FQ8IUX4 373 aaKnown RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 FOXP4Q8IVH2 680 aaPredicted RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 GPC2Q8N158 579 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 OR8H2Q8N162 312 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 CCDC148Q8NFR7 591 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 TRIB2Q92519 343 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 SYAP1Q96A49 352 aaPredicted RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ERP27Q96DN0 273 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 SLC41A2Q96JW4 573 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 APOLD1Q96LR9 279 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 C1QTNF5Q9BXJ0 243 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 CPVLQ9H3G5 476 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 PDZD7Q9H5P4 517 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 TCP11L1Q9NUJ3 509 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 NKIRAS2Q9NYR9 191 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 OR6C3Q9NZP0 311 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 FBXL17Q9UF56 701 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 MAD2L2Q9UI95 211 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 CFAP45Q9UL16 551 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 NOL7Q9UMY1 257 aaKnown RBP4.23□□□□□ -1.73
TRAV15-201ENST00000556680 SNX8Q9Y5X2 465 aa4.23□□□□□ -1.73
TRAV15-201ENST00000556680 ASTN2O75129 1339 aaPredicted RBP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 FAM90A8PA6NJQ4 464 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 A8MZ25 164 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 I6L893 689 aaPredicted RBP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 VWA5AO00534 786 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 SOCS2O14508 198 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 PPEF2O14830 753 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 ASAP2O43150 1006 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 JRKO75564 520 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 MMP1P03956 469 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 FAM90A13PP0C7W8 464 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 FAM90A24PP0C7X0 464 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 SCG2P13521 617 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 NAGAP17050 411 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 PIGAP37287 484 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 EIF2DP41214 584 aaKnown RBP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 EPS15P42566 896 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 SLC1A4P43007 532 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 CAMPP49913 170 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 MMP14P50281 582 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 CLCN3P51790 818 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 PMS2P54278 862 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 ADORA2A-AS1P86434 159 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 GABPAQ06546 454 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 ACSM2AQ08AH3 577 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 TROAPQ12815 778 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 LAMB3Q13751 1172 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 KLF9Q13886 244 aaPredicted RBP4.22□□□□□ -1.73
TRAV15-201ENST00000556680 MYBPC2Q14324 1141 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 MMEL1Q495T6 779 aa4.22□□□□□ -1.73
TRAV15-201ENST00000556680 FSCBQ5H9T9 825 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms