RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PPIL3Q9H2H8 161 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 UPF2Q9HAU5 1272 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 MAP3K20Q9NYL2 800 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 TAS2R14Q9NYV8 317 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 AMACRQ9UHK6 382 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 PLAGL1Q9UM63 463 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF644Q9H582 1327 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 hCG_1807616A0A1W2PRN6 198 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 CTDSP2O14595 271 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 FGF5P12034 268 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 PORP16435 677 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 TCEA1P23193 301 aaKnown RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 GCH1P30793 250 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 PSMC6P62333 389 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 EPS8Q12929 822 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 CHAF1BQ13112 559 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 DMP1Q13316 513 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 CUL4AQ13619 759 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 WTAPQ15007 396 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 NDUFAF5Q5TEU4 345 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 TBC1D16Q8TBP0 767 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF473Q8WTR7 871 aaKnown RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
SCFD1-221ENST00000556534 FAM118AQ9NWS6 357 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 NSMCE4AQ9NXX6 385 aa4.28□□□□□ -1.72
SCFD1-221ENST00000556534 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 FAM72CH0Y354 149 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 H0YIN7 160 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 SYNCRIPO60506 623 aaKnown RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 CREG1O75629 220 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 TSPAN9O75954 239 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 GFPT2O94808 682 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 ACSL1P33121 698 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 CASP2P42575 452 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 NRIP1P48552 1158 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 NR2C2P49116 596 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 SNX16P57768 344 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 SNRPEP62304 92 aaKnown RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 TMF1P82094 1093 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 MFAP5Q13361 173 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 DUOXA1Q1HG43 343 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 FAM98BQ52LJ0 330 aaKnown RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 FAM72AQ5TYM5 149 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 ALS2CLQ60I27 953 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 PLA2G4FQ68DD2 849 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 FAM72DQ6L9T8 149 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 KBTBD6Q86V97 674 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 FAM72BQ86X60 149 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF524Q96C55 264 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF501Q96CX3 271 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 PAFAH2Q99487 392 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 RTN4RQ9BZR6 473 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 VPS33BQ9H267 617 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 DENND2DQ9H6A0 471 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 MIOSQ9NXC5 875 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 ACAD8Q9UKU7 415 aa4.27□□□□□ -1.73
SCFD1-221ENST00000556534 RSF1Q96T23 1441 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-221ENST00000556534 TO15178 435 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 GPR137BO60478 399 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 ENTPD3O75355 529 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 LDLRP01130 860 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 CFC1P0CG37 223 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 MSH3P20585 1137 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 THOP1P52888 689 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 PNRC1Q12796 327 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-221ENST00000556534 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 RBM39Q14498 530 aaKnown RBP4.26□□□□□ -1.73
SCFD1-221ENST00000556534 MELKQ14680 651 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 PCLAFQ15004 111 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 TECRLQ5HYJ1 363 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 KRT79Q5XKE5 535 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-221ENST00000556534 CLEC4GQ6UXB4 293 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 INTS8Q75QN2 995 aaKnown RBP4.26□□□□□ -1.73
SCFD1-221ENST00000556534 HAUS6Q7Z4H7 955 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 LINC00346Q8IVM7 164 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 POC5Q8NA72 575 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 TM9SF4Q92544 642 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 SEMA4DQ92854 862 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 CALML4Q96GE6 196 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF148Q9UQR1 794 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 TCF19Q9Y242 345 aa4.26□□□□□ -1.73
SCFD1-221ENST00000556534 PTRH2Q9Y3E5 179 aaKnown RBP4.26□□□□□ -1.73
SCFD1-221ENST00000556534 PRSS51A0A1B0GVH4 220 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ADAMDEC1O15204 470 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 AHCYL1O43865 530 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 PGM3O95394 542 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 TSHBP01222 138 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 PRSS1P07477 247 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 INHBAP08476 426 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 TRIM21P19474 475 aaKnown RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 CBLP22681 906 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 PRKG2Q13237 762 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ZC2HC1CQ53FD0 456 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms