RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 P2RY12Q9H244 342 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 TCEAL2Q9H3H9 227 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 DPEP2Q9H4A9 486 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 RHOJQ9H4E5 214 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 STN1Q9H668 368 aaKnown RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 ACSS3Q9H6R3 686 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 PPCSQ9HAB8 311 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 IL21RQ9HBE5 538 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 PLAC1Q9HBJ0 212 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FBXO6Q9NRD1 293 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 NLGN3Q9NZ94 848 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 DNAJC16Q9Y2G8 782 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 PRKAB1Q9Y478 270 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 KIR2DS5A0A0G2JLQ3 304 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 A0A0G2JNG1 304 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 EXOC1LA0A1B0GW35 172 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 PDZK1P1A8MUH7 402 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 KIR2DS3K7RE56 304 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 IFRD1O00458 451 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 CDX4O14627 284 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 YY2O15391 372 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 FFAR2O15552 330 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 ZW10O43264 779 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 RIPK2O43353 540 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SNX2O60749 519 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 HAUS5O94927 633 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 AHSGP02765 367 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SLC35G4P0C7Q5 338 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 MYBL2P10244 700 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 AK4P27144 223 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 MSH2P43246 934 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SERPINB9P50453 376 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 DUSP3P51452 185 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 BOP1Q14137 746 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 KIR2DS5Q14953 304 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SHBQ15464 509 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 GRTP1Q5TC63 336 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 AGAP9Q5VTM2 703 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 METRNLQ641Q3 311 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 FAM45BPQ6NSW5 357 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 ZCCHC8Q6NZY4 707 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 CNSTQ6PJW8 725 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 WASH2PQ6VEQ5 465 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 C11orf96Q7Z7L8 435 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 ZC3HC1Q86WB0 502 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 GATAD2AQ86YP4 633 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 CFAP206Q8IYR0 622 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 KIAA2013Q8IYS2 634 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SLC25A45Q8N413 288 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 GPATCH11Q8N954 259 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 OR4C6Q8NH72 309 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 FAM45AQ8TCE6 357 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 AENQ8WTP8 325 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 KCNJ9Q92806 393 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 CAVIN3Q969G5 261 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 TSPAN17Q96FV3 270 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 BIRC8Q96P09 236 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 CDC6Q99741 560 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 AARSD1Q9BTE6 412 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 TXLNGYQ9BZA5 131 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SLC32A1Q9H598 525 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 COG4Q9H9E3 785 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SARS2Q9NP81 518 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 WASH6PQ9NQA3 447 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 SPATS2LQ9NUQ6 558 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 ARGLU1Q9NWB6 273 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 UCKL1Q9NWZ5 548 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 TAS2R13Q9NYV9 303 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 TAAR2Q9P1P5 351 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 FAM8A1Q9UBU6 413 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 RABGEF1Q9UJ41 708 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 TRMT6Q9UJA5 497 aaKnown RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 PNMA8BQ9ULN7 279 aaPredicted RBP7.5□□□□□ -1.21
TDP1-214ENST00000556063 KCNK6Q9Y257 313 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 VWA7Q9Y334 891 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 PRSS21Q9Y6M0 314 aa7.5□□□□□ -1.21
TDP1-214ENST00000556063 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CCDC151A5D8V7 595 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 POC1B-GALNT4F8VUJ3 575 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 EIF3FO00303 357 aaPredicted RBP7.49□□□□□ -1.21
TDP1-214ENST00000556063 SGTAO43765 313 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KDM1AO60341 852 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 NIPSNAP2O75323 286 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KRT37O76014 449 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 KRT38O76015 456 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 F3P13726 295 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 ENO3P13929 434 aaPredicted RBP7.49□□□□□ -1.21
TDP1-214ENST00000556063 ITGB6P18564 788 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CD9P21926 228 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 CNTFP26441 200 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 NDUFS1P28331 727 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 PLA2G5P39877 138 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 MAPK9P45984 424 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 RGS4P49798 205 aa7.49□□□□□ -1.21
TDP1-214ENST00000556063 DAB2P98082 770 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms