RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RAET1EQ8TD07 263 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 MIPOL1Q8TD10 442 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CD200R1Q8TD46 325 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 MAGEE2Q8TD90 523 aaPredicted RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 PLD4Q96BZ4 506 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 BIRC7Q96CA5 298 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 MYEOVQ96EZ4 313 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 FBXL20Q96IG2 436 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CAPNS2Q96L46 248 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 B3GALT6Q96L58 329 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TEX37Q96LM6 180 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 RNF145Q96MT1 663 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 SEZ6LQ9BYH1 1024 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TRIM8Q9BZR9 551 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 HIPK3Q9H422 1215 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 HEBP1Q9NRV9 189 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 GALPQ9UBC7 116 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 IKZF3Q9UKT9 509 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 GMEB1Q9Y692 573 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 SLC30A1Q9Y6M5 507 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 A0A1B0GVM2 712 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 H0YAE9 185 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 DLGAP1O14490 977 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 GSTA4O15217 222 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ACOX3O15254 700 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RAD51BO15315 384 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 OR1I1O60431 355 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 AOC2O75106 756 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 TSPAN12O95859 305 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 OTCP00480 354 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ALDH2P05091 517 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 HMOX2P30519 316 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 SOX11P35716 441 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RGRP47804 291 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RPIAP49247 311 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RGS4P49798 205 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RPS24P62847 133 aaKnown RBP6.9□□□□□ -1.3
TDP1-213ENST00000555880 FAM189BP81408 668 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CHRNB3Q05901 458 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CACNG1Q06432 222 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 TWF1Q12792 350 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 DUSP4Q13115 394 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 MAD2L1Q13257 205 aaPredicted RBP6.9□□□□□ -1.3
TDP1-213ENST00000555880 MRPL58Q14197 206 aaKnown RBP6.9□□□□□ -1.3
TDP1-213ENST00000555880 TGFBIQ15582 683 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CTSL3PQ5NE16 218 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CCNYL2Q5T2Q4 361 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 HECTD3Q5T447 861 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 GLYATQ6IB77 296 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
TDP1-213ENST00000555880 GPR180Q86V85 440 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 DENND1CQ8IV53 801 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 PIANPQ8IYJ0 282 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 OR2T11Q8NH01 316 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ITFG1Q8TB96 612 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 PROKR1Q8TCW9 393 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ADAMTS16Q8TE57 1224 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 NRBF2Q96F24 287 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 C17orf80Q9BSJ5 609 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CHID1Q9BWS9 393 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 OSBPL6Q9BZF3 934 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 GPR63Q9BZJ6 419 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CLPBQ9H078 707 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ING2Q9H160 280 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 CXorf21Q9HAI6 301 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 PLGRKTQ9HBL7 147 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 BPIFA1Q9NP55 256 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 INTS7Q9NVH2 962 aaKnown RBP6.9□□□□□ -1.3
TDP1-213ENST00000555880 GALNT8Q9NY28 637 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 ANGPTL3Q9Y5C1 460 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 V9GYQ6 96 aa6.9□□□□□ -1.3
TDP1-213ENST00000555880 TRIM64A6NGJ6 449 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 H3BNC9 293 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 H7C0S8 307 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ARNTLO00327 626 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PRMT5O14744 637 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 KCNH1O95259 989 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PRLP01236 227 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CAPN1P07384 714 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ANXA6P08133 673 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 RAP2AP10114 183 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ELNP15502 786 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CR2P20023 1033 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 MSH3P20585 1137 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 JAK1P23458 1154 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 EEF1B2P24534 225 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 NFKBIAP25963 317 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CCND3P30281 292 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 AKT1P31749 480 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms