RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 IL1BP01584 269 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ANXA4P09525 319 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 DAOAP59103 153 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 RAB2AP61019 212 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GJD3Q8N144 294 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 LIX1Q8N485 282 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 PACRGLQ8N7B6 248 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 KLHL23Q8NBE8 558 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 PIK3R3Q92569 461 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ASB9Q96DX5 294 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 MCMBPQ9BTE3 642 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 OXSMQ9NWU1 459 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 PER2O15055 1255 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 IFNA6P05013 189 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ADH1AP07327 375 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 NCK1P16333 377 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CDH4P55283 916 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 IL10RBQ08334 325 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CAMK1Q14012 370 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 TNFAIP8L3Q5GJ75 292 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 FAM98AQ8NCA5 519 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 OR10A6Q8NH74 314 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 RASSF5Q8WWW0 418 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PRAMEF1O95521 474 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CLK3P49761 638 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 GNA12Q03113 381 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 DCST1Q5T197 706 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF613Q6PF04 617 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 OAFQ86UD1 273 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 BRSK1Q8TDC3 778 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 MED28Q9H204 178 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 SNX7Q9UNH6 387 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 FAM234BA2RU67 622 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 C9JVG2 144 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 H3BM21 787 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 COL6A1P12109 1028 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 SLC1A2P43004 574 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 LAPTM5Q13571 262 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF460Q14592 562 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 TEAD4Q15561 434 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 MPPE1Q53F39 396 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CCSAPQ6IQ19 270 aaPredicted RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 OR8D1Q8WZ84 308 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PIGKQ92643 395 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CNTN3Q9P232 1028 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 INSIG1O15503 277 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 S100GP29377 79 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PTGER3P43115 390 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 BEND5Q7L4P6 421 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 PHC3Q8NDX5 983 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 OR5K1Q8NHB7 308 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 NEK7Q8TDX7 302 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 HMCESQ96FZ2 354 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 TRNT1Q96Q11 434 aaKnown RBP13.79□□□□□ -0.2
VTI1B-204ENST00000554659 CHCHD6Q9BRQ6 235 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 MAN2B2Q9Y2E5 1009 aa13.79□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF99A8MXY4 864 aaPredicted RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 TSPAN4O14817 238 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 SLC25A12O75746 678 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF432O94892 652 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 C2orf80Q0P641 193 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MERTKQ12866 999 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 DUSP4Q13115 394 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 LCN1P1Q5VSP4 162 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 TMEM214Q6NUQ4 689 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF433Q8N7K0 673 aaPredicted RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 CMASQ8NFW8 434 aaPredicted RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ADAMTS15Q8TE58 950 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 PCED1BQ96HM7 432 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 NSMCE3Q96MG7 304 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 TFB2MQ9H5Q4 396 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 EIF2B4Q9UI10 523 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 UGT1A9O60656 530 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 KERAO60938 352 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 CA9Q16790 459 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms