RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCDC175P0C221 793 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 LINGO3P0C6S8 592 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 PFKFB1P16118 471 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 PEX5P50542 639 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 CDK3Q00526 305 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 LTBQ06643 244 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 KIF5AQ12840 1032 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 ALDH1L2Q3SY69 923 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 KLHL26Q53HC5 615 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 TRNP1Q6NT89 227 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF704Q6ZNC4 412 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 FAM47EQ6ZV65 393 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 CENPVQ7Z7K6 275 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 ANKRD23Q86SG2 305 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM173Q86WV6 379 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 OR2AJ1Q8NGZ0 328 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 MRPS27Q92552 414 aaKnown RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 NEUROG1Q92886 237 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 NXNL1Q96CM4 212 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 FAM84BQ96KN1 310 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 MOV10L1Q9BXT6 1211 aaKnown RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 FAM129AQ9BZQ8 928 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 NOL11Q9H8H0 719 aaKnown RBP4.99□□□□□ -1.61
SYNE2-210ENST00000553455 TUBE1Q9UJT0 475 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 A0A0G2JPF8 293 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ZCWPW2A0A1B0GU75 182 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 PRSS51A0A1B0GVH4 220 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 HNRNPCL3B7ZW38 293 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 OR10H2O60403 315 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 GCNT3O95395 438 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 BMP15O95972 392 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ALPLP05186 524 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 FAM106CPP0CH98 169 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 HNRNPCL4P0DMR1 293 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 POLR2CP19387 275 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 RAB28P51157 221 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 RNASEH2BQ5TBB1 312 aaKnown RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ASB18Q6ZVZ8 466 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF441Q8N8Z8 693 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 PAPD5Q8NDF8 572 aaKnown RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 LILRB1Q8NHL6 650 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 BBS10Q8TAM1 723 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 PPP4R1Q8TF05 950 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 PHF21AQ96BD5 680 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 HDAC11Q96DB2 347 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF385AQ96PM9 386 aaKnown RBP4.98□□□□□ -1.61
SYNE2-210ENST00000553455 LRMDAQ9H2I8 198 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 DPAGT1Q9H3H5 408 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 HHATLQ9HCP6 504 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF112Q9UJU3 913 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 DLGAP4Q9Y2H0 992 aa4.98□□□□□ -1.61
SYNE2-210ENST00000553455 ANKUB1A6NFN9 424 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM221A6NGB7 291 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 C4orf47A7E2U8 309 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 DVL1O14640 695 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 XRCC3O43542 346 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 WDR1O75083 606 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 MED24O75448 989 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 RECQL5O94762 991 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 CELF2O95319 508 aaKnown RBP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 NGFRP08138 427 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 DANCRP0C864 163 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 PTAFRP25105 342 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 USP8P40818 1118 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 CCR10P46092 362 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TFCP2Q12800 502 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 SNTA1Q13424 505 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 NR1D2Q14995 579 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 SF3B4Q15427 424 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 HYAL4Q2M3T9 481 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM35AQ53FP2 167 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 ARMC4Q5T2S8 1044 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 GCNT6Q5T4J0 391 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 SUSD1Q6UWL2 747 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 CREB3L2Q70SY1 520 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 GBGT1Q8N5D6 347 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 KIF18AQ8NI77 898 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM255BQ8WV15 326 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 SMPDL3BQ92485 455 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 FIG4Q92562 907 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 ADGRG7Q96K78 797 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 FAM81BQ96LP2 452 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 SLC25A23Q9BV35 468 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 NUP85Q9BW27 656 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TBC1D17Q9HA65 648 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 PIH1D3Q9NQM4 214 aaKnown RBP4.97□□□□□ -1.61
SYNE2-210ENST00000553455 OSER1Q9NX31 292 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 VDAC3Q9Y277 283 aa4.97□□□□□ -1.61
SYNE2-210ENST00000553455 TRIM77I1YAP6 450 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 ZNHIT1O43257 154 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 SMAD6O43541 496 aaKnown RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 NTN1O95631 604 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 PPP1R3DO95685 299 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 IFNAR1P17181 557 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 GM2AP17900 193 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms