RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	TMCO5B	A8MYB1	307 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	IFNL4	K9M1U5	179 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	SELENOF	O60613	162 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	MFN2	O95140	757 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	OTC	P00480	354 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KRT14	P02533	472 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	CHRM2	P08172	466 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KRT3	P12035	628 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	PKM	P14618	531 aa	Known RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KLRC2	P26717	231 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	OTX2	P32243	289 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	PCGF2	P35227	344 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	PTGS2	P35354	604 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	NUP62	P37198	522 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	CAPG	P40121	348 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	GATM	P50440	423 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ARSE	P51690	589 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF134	P52741	427 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	MTTP	P55157	894 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ATP5I	P56385	69 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ABAT	P80404	500 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	DGCR2	P98153	550 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	WDR43	Q15061	677 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	SLC27A1	Q6PCB7	646 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	GJB7	Q6PEY0	223 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KCNV1	Q6PIU1	500 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	DOK3	Q7L591	496 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF551	Q7Z340	670 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	PRSS42	Q7Z5A4	293 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	SLC15A3	Q8IY34	581 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	CFAP52	Q8N1V2	620 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	GBP7	Q8N8V2	638 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	RASGEF1A	Q8N9B8	481 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440		Q8NA96	180 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	LEMD2	Q8NC56	503 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	HJURP	Q8NCD3	748 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	RNF169	Q8NCN4	708 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ZFP28	Q8NHY6	868 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	NT5C3B	Q969T7	300 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ST6GALNAC6	Q969X2	333 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	VCPIP1	Q96JH7	1222 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	SLC41A2	Q96JW4	573 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	TRIB1	Q96RU8	372 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ASCL2	Q99929	193 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	JPH2	Q9BR39	696 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	H2AFJ	Q9BTM1	129 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	MINDY3	Q9H8M7	445 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	GBA2	Q9HCG7	927 aa	Predicted RBP	4.15	□□□□□ -1.75
USP44-208	ENST00000552440	ASAH2	Q9NR71	780 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	SLC6A13	Q9NSD5	602 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KIAA1456	Q9P272	454 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	KL	Q9UEF7	1012 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440	C15orf41	Q9Y2V0	281 aa		4.15	□□□□□ -1.75
USP44-208	ENST00000552440		A0A1W2PRX2	142 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	OR6C74	A6NCV1	312 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	MAGEB17	A8MXT2	336 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	ZNF879	B4DU55	563 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TRIM24	O15164	1050 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TEX28	O15482	410 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TLX2	O43763	284 aa	Predicted RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	HSF2BP	O75031	334 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CRCP	O75575	148 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	GCAT	O75600	419 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TOM1L1	O75674	476 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	WDR47	O94967	919 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	IGHE	P01854	428 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	YES1	P07947	543 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	SBK2	P0C263	348 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	EBLN1	P0CF75	366 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	RALB	P11234	206 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	FCER1A	P12319	257 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	GNAZ	P19086	355 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	ADRA1D	P25100	572 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	POU1F1	P28069	291 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CDKN1A	P38936	164 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	PXN	P49023	591 aa	Predicted RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CLK3	P49761	638 aa	Known RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TAS2R50	P59544	299 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	NANOS3	P60323	173 aa	Known RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	PTEN	P60484	403 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	SRP54	P61011	504 aa	Known RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	GALK2	Q01415	458 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TLE3	Q04726	772 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	FGFBP1	Q14512	234 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	LARS2	Q15031	903 aa	Known RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	IQCC	Q4KMZ1	466 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	ARHGEF16	Q5VV41	709 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	FAM90A2P	Q658T7	463 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	PDPK2P	Q6A1A2	396 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	PMF1	Q6P1K2	205 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.14	□□□□□ -1.75
USP44-208	ENST00000552440	COMTD1	Q86VU5	262 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	GPR135	Q8IZ08	494 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CPXM2	Q8N436	756 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	CLEC1A	Q8NC01	280 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	PSD4	Q8NDX1	1056 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	OR2T3	Q8NH03	318 aa		4.14	□□□□□ -1.75
USP44-208	ENST00000552440	HEXDC	Q8WVB3	486 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms