RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PPP4R1Q8TF05 950 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 POM121Q96HA1 1249 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 NUP85Q9BW27 656 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 ETNK2Q9NVF9 386 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 NFKBIL1Q9UBC1 381 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-220ENST00000551716 WDR37Q9Y2I8 494 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 E2F3O00716 465 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 PCK1P35558 622 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 DSC2Q02487 901 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 QPCTQ16769 361 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 ZNF630Q2M218 657 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 HSP90AA4PQ58FG1 418 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 FKBP15Q5T1M5 1219 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 ZFYVE27Q5T4F4 411 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 PLEKHA7Q6IQ23 1121 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 MTFR2Q6P444 385 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 CYP4V2Q6ZWL3 525 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 AMZ2Q86W34 360 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 TRAPPC5Q8IUR0 188 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 NXPE1Q8N323 547 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 TTC30BQ8N4P2 665 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 BEND7Q8N7W2 519 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 DNAJB14Q8TBM8 379 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 BRSK1Q8TDC3 778 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 FATE1Q969F0 183 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 NACC2Q96BF6 587 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 TTC25Q96NG3 672 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 CSPG4P5Q96PW8 444 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 TRAPPC9Q96Q05 1148 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 SUCOQ9UBS9 1254 aaKnown RBP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 GPN3Q9UHW5 284 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-220ENST00000551716 PCNX1Q96RV3 2341 aa14.9□□□□□ -0.02
CACNB3-220ENST00000551716 SLC9B1P1A6NJY1 282 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 MATN3O15232 486 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 LDB2O43679 373 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 KLF7O75840 302 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-220ENST00000551716 SSTR2P30874 369 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 DMPKQ09013 629 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 PRKAA1Q13131 559 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 TESK1Q15569 626 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 ANO6Q4KMQ2 910 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 PRAMEF17Q5VTA0 474 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 SPOCD1Q6ZMY3 1216 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 BNC2Q6ZN30 1099 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-220ENST00000551716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
CACNB3-220ENST00000551716 GPR26Q8NDV2 337 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 ARRDC2Q8TBH0 407 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 MAML1Q92585 1016 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 C1GALT1Q9NS00 363 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 P4HTMQ9NXG6 502 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
CACNB3-220ENST00000551716 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 DNMT3AQ9Y6K1 912 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-220ENST00000551716 MED13LQ71F56 2210 aa14.89□□□□□ -0.03
CACNB3-220ENST00000551716 TMEM150CB9EJG8 249 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 MATN2O00339 956 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 HTR1EP28566 365 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 FOLR3P41439 243 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 PREPP48147 710 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 TMEM115Q12893 351 aaPredicted RBP14.88□□□□□ -0.03
CACNB3-220ENST00000551716 ABRQ12979 859 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 CDC16Q13042 620 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 AIMP2Q13155 320 aaKnown RBP14.88□□□□□ -0.03
CACNB3-220ENST00000551716 IHHQ14623 411 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF169Q14929 603 aaPredicted RBP14.88□□□□□ -0.03
CACNB3-220ENST00000551716 TLR1Q15399 786 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 CAMK4Q16566 473 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 CYP2A13Q16696 494 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 CCDC122Q5T0U0 273 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 AGAP7PQ5VUJ5 663 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 IRAK1BP1Q5VVH5 260 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 ALS2CLQ60I27 953 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 FAM180AQ6UWF9 173 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 C11orf96Q7Z7L8 435 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF808Q8N4W9 903 aaPredicted RBP14.88□□□□□ -0.03
CACNB3-220ENST00000551716 PTERQ96BW5 349 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 AGAP4Q96P64 663 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 GBP5Q96PP8 586 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 VPS35Q96QK1 796 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 SRPK1Q96SB4 655 aaKnown RBP14.88□□□□□ -0.03
CACNB3-220ENST00000551716 SLX1AQ9BQ83 275 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 TLR10Q9BXR5 811 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 MAGEE1Q9HCI5 957 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 DTLQ9NZJ0 730 aa14.88□□□□□ -0.03
CACNB3-220ENST00000551716 TACC2O95359 2948 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 OR6C74A6NCV1 312 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 E7EQ34 232 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 MTHFD1P11586 935 aaKnown RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 CDH3P22223 829 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 CCNCP24863 283 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 XRCC4Q13426 336 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 IFI16Q16666 785 aaKnown RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 PTCHD3Q3KNS1 767 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 MLIPQ5VWP3 458 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 IGFL2Q6UWQ7 119 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 RPTNQ6XPR3 784 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 B4GALNT4Q76KP1 1039 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 TMC3Q7Z5M5 1100 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 BCORP1Q8N888 145 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms