RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	CYP4F3	Q08477	520 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	GTF2H3	Q13889	308 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	BRD3	Q15059	726 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	RPE65	Q16518	533 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	GPR33	Q49SQ1	333 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	METRNL	Q641Q3	311 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	AFTPH	Q6ULP2	937 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	ABRAXAS1	Q6UWZ7	409 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	VRK3	Q8IV63	474 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	SLITRK4	Q8IW52	837 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	PPIL6	Q8IXY8	311 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	KRT222	Q8N1A0	295 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	GALNT15	Q8N3T1	639 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	SPATA4	Q8NEY3	305 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	OR2L2	Q8NH16	312 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	ULK4	Q96C45	1275 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	LINC00615	Q96LM1	132 aa	Predicted RBP	10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	TTC25	Q96NG3	672 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	IL22	Q9GZX6	179 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	ABCG4	Q9H172	646 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	NCKIPSD	Q9NZQ3	722 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	BFAR	Q9NZS9	450 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	GALP	Q9UBC7	116 aa		10.99	□□□□□ -0.65
RAB5B-208	ENST00000550283	LAMA5	O15230	3695 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	RHPN2P1	A8MT19	583 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	GAS8	O95995	478 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	PNLIP	P16233	465 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	ETV5	P41161	510 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	ZFP36L1	Q07352	338 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	DHX9	Q08211	1270 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	C16orf72	Q14CZ0	275 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	FASTKD3	Q14CZ7	662 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	ANKRD20A4	Q4UJ75	823 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	CTSL3P	Q5NE16	218 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	AGAP9	Q5VTM2	703 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	RBM44	Q6ZP01	1051 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	CFAP206	Q8IYR0	622 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	RCBTB1	Q8NDN9	531 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	GRK7	Q8WTQ7	553 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	PMEPA1	Q969W9	287 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	LRRC45	Q96CN5	670 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	RNF31	Q96EP0	1072 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	GFM1	Q96RP9	751 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	P2RY12	Q9H244	342 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	OR52A5	Q9H2C5	316 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	COG4	Q9H9E3	785 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	MRM3	Q9HC36	420 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	SLC40A1	Q9NP59	571 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	SARS2	Q9NP81	518 aa	Known RBP	10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	GRHL1	Q9NZI5	618 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	SNX24	Q9Y343	169 aa		10.98	□□□□□ -0.65
RAB5B-208	ENST00000550283	IGHV5-10-1	A0A0J9YXX1	117 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	KRT87P	A6NCN2	255 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CD3EAP	O15446	510 aa	Known RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	TLX3	O43711	291 aa	Predicted RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	SEC31A	O94979	1220 aa	Known RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	TPBGL	P0DKB5	382 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	MLN	P12872	115 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	TYRP1	P17643	537 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	XRCC1	P18887	633 aa	Predicted RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	IDS	P22304	550 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CCR7	P32248	378 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	MAPK9	P45984	424 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	PGGT1B	P53609	377 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	ITGA8	P53708	1063 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CSE1L	P55060	971 aa	Known RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	GFER	P55789	205 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	PRAME	P78395	509 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	SPIDR	Q14159	915 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	GPR18	Q14330	331 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	C3orf38	Q5JPI3	329 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	WASH2P	Q6VEQ5	465 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	PACS1	Q6VY07	963 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CENPU	Q71F23	418 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	TMEM135	Q86UB9	458 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	DENND6A	Q8IWF6	608 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CACTIN-AS1	Q8N1I8	211 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	LMNTD1	Q8N9Z9	388 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	PHC3	Q8NDX5	983 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	RSC1A1	Q92681	617 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	ZNF669	Q96BR6	464 aa	Predicted RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	DCUN1D1	Q96GG9	259 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	SGSM3	Q96HU1	749 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	DPH5	Q9H2P9	285 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	WASH6P	Q9NQA3	447 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CATSPERZ	Q9NTU4	200 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	KCNK4	Q9NYG8	393 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	SATB2	Q9UPW6	733 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	CDYL	Q9Y232	598 aa		10.97	□□□□□ -0.65
RAB5B-208	ENST00000550283	KIR2DS5	A0A0G2JLQ3	304 aa		10.96	□□□□□ -0.65
RAB5B-208	ENST00000550283		A0A0G2JNG1	304 aa		10.96	□□□□□ -0.65
RAB5B-208	ENST00000550283	FAM237B	A0A1B0GVD1	139 aa		10.96	□□□□□ -0.65
RAB5B-208	ENST00000550283	SLC5A10	A0PJK1	596 aa		10.96	□□□□□ -0.65
RAB5B-208	ENST00000550283	SDR42E2	A6NKP2	422 aa		10.96	□□□□□ -0.65
RAB5B-208	ENST00000550283	CCDC188	H7C350	402 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms