RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 GVINP1Q7Z2Y8 2422 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 EXOC1LA0A1B0GW35 172 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 LMO7DNF2Z398 122 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 POC1B-GALNT4F8VUJ3 575 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 H3BMM5 538 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 YY2O15391 372 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 PCDHGA12O60330 932 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 FOXD2O60548 495 aaPredicted RBP20.81■□□□□ 0.92
VPS29-206ENST00000549578 ZNF883P0CG24 379 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 VCLP18206 1134 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CHRM3P20309 590 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CCR7P32248 378 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CSE1LP55060 971 aaKnown RBP20.81■□□□□ 0.92
VPS29-206ENST00000549578 BOP1Q14137 746 aaKnown RBP20.81■□□□□ 0.92
VPS29-206ENST00000549578 BRD3Q15059 726 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 UAP1L1Q3KQV9 507 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 ZNF658BQ4V348 819 aaPredicted RBP20.81■□□□□ 0.92
VPS29-206ENST00000549578 GKN2Q86XP6 184 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CFAP206Q8IYR0 622 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 ACVR1CQ8NER5 493 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 HM13Q8TCT9 377 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 VPS39Q96JC1 886 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 PANX3Q96QZ0 392 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 RBBP8Q99708 897 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 TSSK1BQ9BXA7 367 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 TAAR2Q9P1P5 351 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 GALPQ9UBC7 116 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CSNK1G3Q9Y6M4 447 aa20.81■□□□□ 0.92
VPS29-206ENST00000549578 CCDC151A5D8V7 595 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 PRR19A6NJB7 356 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 C4orf47A7E2U8 309 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 E5RI56 91 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 SNX2O60749 519 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 SHBGP04278 402 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 ANXA6P08133 673 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 GIMD1P0DJR0 217 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 DMPKQ09013 629 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 SEPT7Q16181 437 aaKnown RBP20.8■□□□□ 0.92
VPS29-206ENST00000549578 FAM46DQ8NEK8 389 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 PAFAH2Q99487 392 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 COG4Q9H9E3 785 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 SPATS2LQ9NUQ6 558 aaKnown RBP20.8■□□□□ 0.92
VPS29-206ENST00000549578 TBC1D29Q9UFV1 150 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 CORO1CQ9ULV4 474 aaPredicted RBP20.8■□□□□ 0.92
VPS29-206ENST00000549578 COMMD10Q9Y6G5 202 aa20.8■□□□□ 0.92
VPS29-206ENST00000549578 C17orf113A0A1B0GUU1 675 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 FAM95CA0A1B0GW59 222 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 NEMP2A6NFY4 417 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 ERLIN1O75477 346 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 EML2O95834 649 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 RPL10P27635 214 aaKnown RBP20.79■□□□□ 0.92
VPS29-206ENST00000549578 PREPP48147 710 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 CLCNKAP51800 687 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 PGGT1BP53609 377 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 CDKN2DP55273 166 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 GRTP1Q5TC63 336 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 HECTD2Q5U5R9 776 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 SFTPA2Q8IWL1 248 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 MREGQ8N565 214 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 SLC44A1Q8WWI5 657 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 KCNJ9Q92806 393 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 ELMO2Q96JJ3 720 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 PRDM8Q9NQV8 689 aa20.79■□□□□ 0.92
VPS29-206ENST00000549578 MTO1Q9Y2Z2 717 aaKnown RBP20.79■□□□□ 0.92
VPS29-206ENST00000549578 ARHGEF17Q96PE2 2063 aaPredicted RBP20.79■□□□□ 0.92
VPS29-206ENST00000549578 KLHL33A6NCF5 533 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 KCNJ13O60928 360 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 GSTM1P09488 218 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SAT1P21673 171 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 AOAHP28039 575 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SPRP35270 261 aaPredicted RBP20.78■□□□□ 0.92
VPS29-206ENST00000549578 CLCN7P51798 805 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 LIMK2P53671 638 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 TIAL1Q01085 375 aaKnown RBP eCLIP20.78■□□□□ 0.92
VPS29-206ENST00000549578 GSTM4Q03013 218 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SYTL3Q4VX76 610 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 METRNLQ641Q3 311 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 OTOAQ7RTW8 1153 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 PIM3Q86V86 326 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 KIAA2013Q8IYS2 634 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SDR16C5Q8N3Y7 309 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SIDT2Q8NBJ9 832 aaKnown RBP20.78■□□□□ 0.92
VPS29-206ENST00000549578 GPR21Q99679 349 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SLC30A3Q99726 388 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 OLFM1Q99784 485 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 DPEP2Q9H4A9 486 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 PSMD13Q9UNM6 376 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 BTBD3Q9Y2F9 522 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 PCDHGB2Q9Y5G2 931 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 ASCC3Q8N3C0 2202 aaKnown RBP20.78■□□□□ 0.92
VPS29-206ENST00000549578 ARID1BQ8NFD5 2236 aaPredicted RBP20.78■□□□□ 0.92
VPS29-206ENST00000549578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.78■□□□□ 0.92
VPS29-206ENST00000549578 PDZK1P1A8MUH7 402 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 B4DGG1 531 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 TRIM38O00635 465 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 VPS26AO75436 327 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 INHBAP08476 426 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 IDSP22304 550 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 GCAP28676 217 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 MSH2P43246 934 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms