RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CRHR1P34998 444 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 HOXD12P35452 270 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 MAPK9P45984 424 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 SLC18A1P54219 525 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 SRP54P61011 504 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 ARHGAP8P85298 464 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 TIAL1Q01085 375 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 RPA4Q13156 261 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 BOP1Q14137 746 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 ZC3H14Q6PJT7 736 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 PAQR3Q6TCH7 311 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 CRTC3Q6UUV7 619 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 PIM3Q86V86 326 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 AMZ2Q86W34 360 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 OXR1Q8N573 874 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 BANPQ8N9N5 519 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 OR2L2Q8NH16 312 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 C1orf216Q8TAB5 229 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 FAM136AQ96C01 138 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 PDLIM5Q96HC4 596 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 UBXN10Q96LJ8 280 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 PRRX2Q99811 253 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 SLC13A1Q9BZW2 595 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 NMRAL1Q9HBL8 299 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 C11orf16Q9NQ32 467 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 DGKBQ9Y6T7 804 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 A0A1B0GTW7 788 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 FOXO6A8MYZ6 492 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 TLR4O00206 839 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 VILLO15195 856 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 TM9SF1O15321 606 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 ZWINTO95229 277 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 RASGRP1O95267 797 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 WISP3O95389 354 aaPredicted RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 TNFP01375 233 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 CCR7P32248 378 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 C21orf59P57076 290 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 ATP6V0D1P61421 351 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 PPARDQ03181 441 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 SIM2Q14190 667 aaPredicted RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 ZNF460Q14592 562 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 SEPT7Q16181 437 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 PYCR3Q53H96 274 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 PPM1JQ5JR12 505 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 KDM7AQ6ZMT4 941 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 NEK10Q6ZWH5 1172 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 ARMCX6Q7L4S7 300 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 CLEC14AQ86T13 490 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 PARGQ86W56 976 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 ZNF547Q8IVP9 402 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 MYO1HQ8N1T3 1032 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 BEND7Q8N7W2 519 aaPredicted RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 LKAAEAR1Q8TD35 194 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 GLMNQ92990 594 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 OR2M4Q96R27 311 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 DERL2Q9GZP9 239 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 CNOT10Q9H9A5 744 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 CARS2Q9HA77 564 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 CYP4F12Q9HCS2 524 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 FGF22Q9HCT0 170 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 KCNK9Q9NPC2 374 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 TRNAU1APQ9NX07 287 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 NKIRAS1Q9NYS0 192 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 SUFUQ9UMX1 484 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 SPAG17Q6Q759 2223 aa15.56■□□□□ 0.08
TRAFD1-203ENST00000547063 TYROBPO43914 113 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GPC4O75487 556 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 SLCO2B1O94956 709 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 RBP1P09455 135 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 NR1D1P20393 614 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 KCNA4P22459 653 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 PBLDP30039 288 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 HPDP32754 393 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GNPDA1P46926 289 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 PPP2R2AP63151 447 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 DMPKQ09013 629 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 HSPA14Q0VDF9 509 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 SRSF5Q13243 272 aaKnown RBP15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 CSHL1Q14406 222 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GBX1Q14549 363 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 ACAP2Q15057 778 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 CCDC153Q494R4 210 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 CHST15Q7LFX5 561 aaPredicted RBP15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 C11orf96Q7Z7L8 435 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 CPNE9Q8IYJ1 553 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 NAT14Q8WUY8 206 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 OR1E3Q8WZA6 343 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 LINGO1Q96FE5 620 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 DPEP2Q9H4A9 486 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GALPQ9UBC7 116 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 MID2Q9UJV3 735 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 ACSL5Q9ULC5 683 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 RUVBL2Q9Y230 463 aaKnown RBP15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 GPSM3Q9Y4H4 160 aa15.55■□□□□ 0.08
TRAFD1-203ENST00000547063 SLC5A10A0PJK1 596 aa15.54■□□□□ 0.08
TRAFD1-203ENST00000547063 H3BQF6 201 aa15.54■□□□□ 0.08
TRAFD1-203ENST00000547063 MPC1LP0DKB6 136 aa15.54■□□□□ 0.08
TRAFD1-203ENST00000547063 ITPKAP23677 461 aa15.54■□□□□ 0.08
TRAFD1-203ENST00000547063 CLCNKAP51800 687 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms