RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FFAR4Q5NUL3 377 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 AKNAQ7Z591 1439 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 PTOV1Q86YD1 416 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 DIS3L2Q8IYB7 885 aaKnown RBP4.25□□□□□ -1.73
SNHG1-224ENST00000545688 DDHD1Q8NEL9 900 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 SGCDQ92629 289 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 ATOH8Q96SQ7 321 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 GFI1Q99684 422 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-224ENST00000545688 ERVMER34-1Q9H9K5 563 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 YIPF1Q9Y548 306 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 KCNE2Q9Y6J6 123 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 PRSS21Q9Y6M0 314 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 RNF215Q9Y6U7 377 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 STK36Q9NRP7 1315 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 NCOA1Q15788 1441 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 FAM237BA0A1B0GVD1 139 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 ZNF217O75362 1048 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 NDUFS3O75489 264 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 ATP1A3P13637 1013 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 CEACAM1P13688 526 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 LIFP15018 202 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 BSGP35613 385 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 GOLGA8DPQ0D2H9 430 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 FRMD1Q8N878 549 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 ETNPPLQ8TBG4 499 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 SMPDL3BQ92485 455 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 ZKSCAN4Q969J2 545 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-224ENST00000545688 SEMA6AQ9H2E6 1030 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 PDCL3Q9H2J4 239 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 RCC2Q9P258 522 aaKnown RBP4.24□□□□□ -1.73
SNHG1-224ENST00000545688 LIMA1Q9UHB6 759 aaKnown RBP4.24□□□□□ -1.73
SNHG1-224ENST00000545688 RASAL2Q9UJF2 1139 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 GOLGA3Q08378 1498 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 RICTORQ6R327 1708 aa4.24□□□□□ -1.73
SNHG1-224ENST00000545688 UHRF1BP1Q6BDS2 1440 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 TEX13DA0A0J9YY54 714 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-224ENST00000545688 ZBTB43O43298 467 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 ARHGEF9O43307 516 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 GCNT3O95395 438 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 SELLP14151 372 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 EPHA2P29317 976 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 HSPA1LP34931 641 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 PIK3CAP42336 1068 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 CCR9P51686 369 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 MVPQ14764 893 aaKnown RBP4.23□□□□□ -1.73
SNHG1-224ENST00000545688 TBCEQ15813 527 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-224ENST00000545688 STXBP4Q6ZWJ1 553 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 TSPAN33Q86UF1 283 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 ARHGAP12Q8IWW6 846 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 OR2T12Q8NG77 320 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 GSDMBQ8TAX9 411 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 LINC00479Q96M42 142 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 RHNO1Q9BSD3 238 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 JMJD4Q9H9V9 463 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 PYGO1Q9Y3Y4 419 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 ATP10AO60312 1499 aa4.23□□□□□ -1.73
SNHG1-224ENST00000545688 PREX1Q8TCU6 1659 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 OR2M5A3KFT3 312 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TMEM189-UBE2V1I3L0A0 370 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 J3QR06 171 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 SH2B2O14492 632 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TCERG1O14776 1098 aaKnown RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 SMAD9O15198 467 aaKnown RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 CLPTM1O96005 669 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 PLA2G4BP0C869 781 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ANXA7P20073 488 aaKnown RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ITGA3P26006 1051 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ACADLP28330 430 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 GALCP54803 685 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TFAP4Q01664 338 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 NIPAL4Q0D2K0 466 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 LRMPQ12912 555 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TUBB2AQ13885 445 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ZNF534Q76KX8 674 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ZNF843Q8N446 348 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TRPC4APQ8TEL6 797 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 SEMA4DQ92854 862 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 ZNF689Q96CS4 500 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TUBB2BQ9BVA1 445 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 WDR13Q9H1Z4 485 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 RRP7BPQ9NSQ0 103 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 SMAD5-AS1Q9Y6J3 95 aa4.22□□□□□ -1.73
SNHG1-224ENST00000545688 MED1Q15648 1581 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-224ENST00000545688 TRAPPC8Q9Y2L5 1435 aa4.21□□□□□ -1.73
SNHG1-224ENST00000545688 EFCAB5A4FU69 1503 aa4.21□□□□□ -1.73
SNHG1-224ENST00000545688 ZFYVE16Q7Z3T8 1539 aa4.21□□□□□ -1.73
SNHG1-224ENST00000545688 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 PLK4O00444 970 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 GPR137BO60478 399 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 NADKO95544 446 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-224ENST00000545688 AGR2O95994 175 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 CLEC3BP05452 202 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 CBLP22681 906 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 THOP1P52888 689 aa4.21□□□□□ -1.74
SNHG1-224ENST00000545688 RPS3AP61247 264 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms