RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 RABGEF1Q9UJ41 708 aa17.54■□□□□ 0.4
TSFM-208ENST00000543727 HEBP2Q9Y5Z4 205 aa17.54■□□□□ 0.4
TSFM-208ENST00000543727 MRFAP1Q9Y605 127 aa17.54■□□□□ 0.4
TSFM-208ENST00000543727 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
TSFM-208ENST00000543727 PPM1DO15297 605 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 CPNE6O95741 557 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 TOP3BO95985 862 aaKnown RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 VIPP01282 170 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 PRSS56P0CW18 603 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 BRAFP15056 766 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 RPS3P23396 243 aaKnown RBP eCLIP17.53■□□□□ 0.42e-8■■■■■ 45.7
TSFM-208ENST00000543727 RPL10P27635 214 aaKnown RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 NDUFS1P28331 727 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 PBLDP30039 288 aaPredicted RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 ARCN1P48444 511 aaKnown RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 ITGA8P53708 1063 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 LONRF1Q17RB8 773 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 KCTD19Q17RG1 926 aaPredicted RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 ZNF658BQ4V348 819 aaPredicted RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 CLDN19Q8N6F1 224 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 OR10G6Q8NH81 332 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 TMEM74Q96NL1 305 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 PANX3Q96QZ0 392 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 EBNA1BP2Q99848 306 aaKnown RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 PHACTR1Q9C0D0 580 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 NRSN2Q9GZP1 204 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 COG4Q9H9E3 785 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 INTS10Q9NVR2 710 aaKnown RBP17.53■□□□□ 0.4
TSFM-208ENST00000543727 KCNK4Q9NYG8 393 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 GNPTGQ9UJJ9 305 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 PCDHB1Q9Y5F3 818 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 FAM169AQ9Y6X4 670 aa17.53■□□□□ 0.4
TSFM-208ENST00000543727 ZCWPW2A0A1B0GU75 182 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 A0A1W2PQM1 296 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 TMEM8BA6NDV4 472 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 H3BMM5 538 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 RAD51CO43502 376 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 DUX1O43812 170 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 NDUFS3O75489 264 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 CCKBRP32239 447 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
TSFM-208ENST00000543727 CD151P48509 253 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 CCL7P80098 99 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 CAV1Q03135 178 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 SEPT7Q16181 437 aaKnown RBP17.52■□□□□ 0.4
TSFM-208ENST00000543727 ISXQ2M1V0 245 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 SPANXN3Q5MJ09 141 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 NEPROQ6NW34 567 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 FAM83HQ6ZRV2 1179 aaPredicted RBP17.52■□□□□ 0.4
TSFM-208ENST00000543727 CILP2Q8IUL8 1156 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 OTUD6BQ8N6M0 293 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.4
TSFM-208ENST00000543727 TMEM159Q96B96 161 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 FAM167BQ9BTA0 163 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 CARD6Q9BX69 1037 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 SLC40A1Q9NP59 571 aa17.52■□□□□ 0.4
TSFM-208ENST00000543727 ZNF624Q9P2J8 865 aaPredicted RBP17.52■□□□□ 0.4
TSFM-208ENST00000543727 IGHV1OR21-1A0A087WYE8 117 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 KPNA5O15131 536 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 CSO75390 466 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 MTHFD1P11586 935 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 ALDH4A1P30038 563 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 SLC19A1P41440 591 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 DRG2P55039 364 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 DHX9Q08211 1270 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 TARDBPQ13148 414 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSFM-208ENST00000543727 EIF3IQ13347 325 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 CAMK2BQ13554 666 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 THOC5Q13769 683 aaKnown RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 SEMA3AQ14563 771 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 CRYMQ14894 314 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 MAP9Q49MG5 647 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 DUPD1Q68J44 220 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 WDR74Q6RFH5 385 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 TMEM26Q6ZUK4 368 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 PIM3Q86V86 326 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 CFAP206Q8IYR0 622 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
TSFM-208ENST00000543727 Q8N9G6 341 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 GATA6Q92908 595 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 NXPE2Q96DL1 559 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 CCDC97Q96F63 343 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 LIN37Q96GY3 246 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 FCRL3Q96P31 734 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 TRIM31Q9BZY9 425 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 STRADBQ9C0K7 418 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 EPB41L5Q9HCM4 733 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 SCHIP1Q9P0W5 487 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 MARCH4Q9P2E8 410 aaPredicted RBP17.51■□□□□ 0.39
TSFM-208ENST00000543727 WDR37Q9Y2I8 494 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 COLEC10Q9Y6Z7 277 aa17.51■□□□□ 0.39
TSFM-208ENST00000543727 E7ESA3 106 aa17.5■□□□□ 0.39
TSFM-208ENST00000543727 IFRD1O00458 451 aaPredicted RBP17.5■□□□□ 0.39
TSFM-208ENST00000543727 TP73O15350 636 aa17.5■□□□□ 0.39
TSFM-208ENST00000543727 EIF3HO15372 352 aaKnown RBP eCLIP17.5■□□□□ 0.39
TSFM-208ENST00000543727 B4GAT1O43505 415 aa17.5■□□□□ 0.39
TSFM-208ENST00000543727 OR1I1O60431 355 aa17.5■□□□□ 0.39
TSFM-208ENST00000543727 ESR1P03372 595 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms