RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 PSMB4P28070 264 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 XIAPP98170 497 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 OTUD4Q01804 1114 aaKnown RBP19.43■□□□□ 0.7
DDX11-220ENST00000542244 LDLRAP1Q5SW96 308 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 METRNLQ641Q3 311 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 RANBP10Q6VN20 620 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 OR13C4Q8NGS5 318 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 C9orf43Q8TAL5 461 aaPredicted RBP19.43■□□□□ 0.7
DDX11-220ENST00000542244 ACTL9Q8TC94 416 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 BRSK1Q8TDC3 778 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 CT55Q8WUE5 264 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 APOBEC4Q8WW27 367 aaKnown RBP19.43■□□□□ 0.7
DDX11-220ENST00000542244 SLC41A2Q96JW4 573 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 RAB33BQ9H082 229 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 GBA3Q9H227 469 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 HACD3Q9P035 362 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 TUBD1Q9UJT1 453 aa19.43■□□□□ 0.7
DDX11-220ENST00000542244 REXO2Q9Y3B8 237 aaKnown RBP19.43■□□□□ 0.7
DDX11-220ENST00000542244 SPENQ96T58 3664 aaKnown RBP19.43■□□□□ 0.7
DDX11-220ENST00000542244 GOLGA6L3A6NEY3 463 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 STX7O15400 261 aaKnown RBP19.42■□□□□ 0.7
DDX11-220ENST00000542244 MTSS1O43312 755 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 PRAMEF1O95521 474 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 NTRK1P04629 796 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 PRSS56P0CW18 603 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 MTHFD1P11586 935 aaKnown RBP19.42■□□□□ 0.7
DDX11-220ENST00000542244 VCLP18206 1134 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 HALP42357 657 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 CDKN1CP49918 316 aaPredicted RBP19.42■□□□□ 0.7
DDX11-220ENST00000542244 RPS18P62269 152 aaKnown RBP19.42■□□□□ 0.7
DDX11-220ENST00000542244 TMPRSS15P98073 1019 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 IL11RAQ14626 422 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 PRAMEF17Q5VTA0 474 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 DENND5AQ6IQ26 1287 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 C11orf63Q6NUN7 778 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 CCDC110Q8TBZ0 833 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 STAMBPL1Q96FJ0 436 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 ZDHHC12Q96GR4 267 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 RMDN2Q96LZ7 410 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 VAT1Q99536 393 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 SMOXQ9NWM0 555 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 TRHDEQ9UKU6 1024 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 TP53TG5Q9Y2B4 290 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 PKP3Q9Y446 797 aa19.42■□□□□ 0.7
DDX11-220ENST00000542244 SOWAHDA6NJG2 315 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 HACD1B0YJ81 288 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 APOC4-APOC2K7ER74 178 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 APOC2P02655 101 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 PDGFAP04085 211 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 POLBP06746 335 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 AKT1P31749 480 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 TUBB3Q13509 450 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 SKOR2Q2VWA4 1001 aaPredicted RBP19.41■□□□□ 0.7
DDX11-220ENST00000542244 ANKRD20A2Q5SQ80 823 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 ANKRD20A1Q5TYW2 823 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 ANKRD20A3Q5VUR7 823 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 RBM12BQ8IXT5 1001 aaKnown RBP19.41■□□□□ 0.7
DDX11-220ENST00000542244 ALG3Q92685 438 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 EFHD1Q9BUP0 239 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 FSD1LQ9BXM9 530 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 ASB8Q9H765 288 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 RELNP78509 3460 aa19.41■□□□□ 0.7
DDX11-220ENST00000542244 CDC14CA4D256 554 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 DNAJB5O75953 348 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 SRP72O76094 671 aaKnown RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 MSH3P20585 1137 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 LPOP22079 712 aaPredicted RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 CTNNA1P35221 906 aaKnown RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 DNASE1L3Q13609 305 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 ITGA9Q13797 1035 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 TAF1AQ15573 450 aaPredicted RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 GPR19Q15760 415 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.4■□□□□ 0.7
DDX11-220ENST00000542244 FAM69BQ5VUD6 431 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 LCN10Q6JVE6 187 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 PPP1R3BQ86XI6 285 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 SIDT2Q8NBJ9 832 aaKnown RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 SLC38A9Q8NBW4 561 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 RBM41Q96IZ5 413 aaKnown RBP19.4■□□□□ 0.7
DDX11-220ENST00000542244 C12orf66Q96MD2 445 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 LACRTQ9GZZ8 138 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 LHX9Q9NQ69 397 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 PCDHA3Q9Y5H8 950 aa19.4■□□□□ 0.7
DDX11-220ENST00000542244 A0A0U1RQJ8 604 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 OR6C74A6NCV1 312 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 OR5K3A6NET4 321 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 MGAT4DA6NG13 374 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 PJA2O43164 708 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 KCNJ13O60928 360 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 PTMSP20962 102 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 CASRP41180 1078 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 KPNA2P52292 529 aaKnown RBP19.39■□□□□ 0.69
DDX11-220ENST00000542244 GEMP55040 296 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 XRCC4Q13426 336 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 LAMB3Q13751 1172 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 PLCL1Q15111 1095 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 CRTC2Q53ET0 693 aaPredicted RBP19.39■□□□□ 0.69
DDX11-220ENST00000542244 ZDHHC20Q5W0Z9 365 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 SARM1Q6SZW1 724 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 OR2L2Q8NH16 312 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms