RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PRPSAP1Q14558 356 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 KCNAB1Q14722 419 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 QPCTQ16769 361 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ANKRD20A3Q5VUR7 823 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 CAPRIN2Q6IMN6 1127 aaKnown RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 FAM199XQ6PEV8 388 aaPredicted RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 ARHGEF18Q6ZSZ5 1173 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ATCAYQ86WG3 371 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 CT55Q8WUE5 264 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 RSC1A1Q92681 617 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 LRRC45Q96CN5 670 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 DPYSL5Q9BPU6 564 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 FSD1LQ9BXM9 530 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 TWSG1Q9GZX9 223 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 SARS2Q9NP81 518 aaKnown RBP14.68□□□□□ -0.06
USB1-203ENST00000539737 RAD18Q9NS91 495 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 KCND3Q9UK17 655 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 PYCARDQ9ULZ3 195 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 DNAJC16Q9Y2G8 782 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 ESPL1Q14674 2120 aa14.68□□□□□ -0.06
USB1-203ENST00000539737 RGSL1A5PLK6 1076 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 C5orf60A6NFR6 353 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 MTX2O75431 263 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 EPOP01588 193 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 HLA-DPA1P20036 260 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 WNT3AP56704 352 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 UBE2IP63279 158 aaKnown RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 OASLQ15646 514 aaKnown RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 P3H1Q32P28 736 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 KDELC1Q6UW63 502 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 C6orf15Q6UXA7 325 aaPredicted RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 FAM92BQ6ZTR7 304 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 RASGRP3Q8IV61 690 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 ESX1Q8N693 406 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 CCDC110Q8TBZ0 833 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 ATG4AQ8WYN0 398 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 OXNAD1Q96HP4 312 aaPredicted RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 PBKQ96KB5 322 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 C9orf72Q96LT7 481 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 NAP1L3Q99457 506 aaPredicted RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 FAM83DQ9H4H8 585 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 KLC4Q9NSK0 619 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 UBP1Q9NZI7 540 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 ZNF624Q9P2J8 865 aaPredicted RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 ATXN10Q9UBB4 475 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 AAR2Q9Y312 384 aaKnown RBP14.67□□□□□ -0.06
USB1-203ENST00000539737 KCTD3Q9Y597 815 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
USB1-203ENST00000539737 MN1Q10571 1320 aaPredicted RBP14.66□□□□□ -0.06
USB1-203ENST00000539737 LRBAP50851 2863 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 PIPSLA2A3N6 862 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 USP27XA6NNY8 438 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 TTLL8A6PVC2 850 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 F5H423 210 aaPredicted RBP14.66□□□□□ -0.06
USB1-203ENST00000539737 MKRN2OSH3BPM6 223 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 PIRTP0C851 137 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 F3P13726 295 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 SLC2A4P14672 509 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 PSMB4P28070 264 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 STIP1P31948 543 aaKnown RBP14.66□□□□□ -0.06
USB1-203ENST00000539737 CXCR5P32302 372 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 MRPL49Q13405 166 aaKnown RBP14.66□□□□□ -0.06
USB1-203ENST00000539737 CCNG2Q16589 344 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 LONRF2Q1L5Z9 754 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 DRICH1Q6PGQ1 229 aaPredicted RBP14.66□□□□□ -0.06
USB1-203ENST00000539737 IPMKQ8NFU5 416 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 EID2BQ96D98 161 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 STAMBPL1Q96FJ0 436 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 OR2AG1Q9H205 316 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 MAGEE1Q9HCI5 957 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 HOMER3Q9NSC5 361 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 VPS18Q9P253 973 aa14.66□□□□□ -0.06
USB1-203ENST00000539737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
USB1-203ENST00000539737 CELSR2Q9HCU4 2923 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 LOC285095A0A1B0GVY8 99 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 OR52A4PA6NMU1 304 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 CES2O00748 559 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 GRID2O43424 1007 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 RFPL1O75677 317 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 RASSF9O75901 435 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 RPL10P27635 214 aaKnown RBP14.65□□□□□ -0.06
USB1-203ENST00000539737 SLC19A1P41440 591 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 DRG2P55039 364 aaKnown RBP14.65□□□□□ -0.06
USB1-203ENST00000539737 GDF10P55107 478 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 MC1RQ01726 317 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 DNASE1L3Q13609 305 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 IL10RAQ13651 578 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 SIX1Q15475 284 aaPredicted RBP14.65□□□□□ -0.06
USB1-203ENST00000539737 KHDC1Q4VXA5 237 aaKnown RBP14.65□□□□□ -0.06
USB1-203ENST00000539737 TCTN3Q6NUS6 607 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 LYSMD3Q7Z3D4 306 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 SLC9B2Q86UD5 537 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 TTC30BQ8N4P2 665 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 CPT1CQ8TCG5 803 aa14.65□□□□□ -0.06
USB1-203ENST00000539737 C1orf54Q8WWF1 131 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms