RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ABHD8Q96I13 439 aa6.37□□□□□ -1.39
TRAV11-201ENST00000539512 FAM84BQ96KN1 310 aaPredicted RBP6.37□□□□□ -1.39
TRAV11-201ENST00000539512 NEK1Q96PY6 1258 aa6.37□□□□□ -1.39
TRAV11-201ENST00000539512 RABEP2Q9H5N1 569 aa6.37□□□□□ -1.39
TRAV11-201ENST00000539512 EVA1AQ9H8M9 152 aa6.37□□□□□ -1.39
TRAV11-201ENST00000539512 MIOSQ9NXC5 875 aa6.37□□□□□ -1.39
TRAV11-201ENST00000539512 DDX25Q9UHL0 483 aaKnown RBP6.37□□□□□ -1.39
TRAV11-201ENST00000539512 OR2M5A3KFT3 312 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 ASPDHA6ND91 283 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 SMTNL1A8MU46 457 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 LDB3O75112 727 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 PPP1R3DO95685 299 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 HLA-DOBP13765 273 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 DGKAP23743 735 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 AHRP35869 848 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 GAS1P54826 345 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 NR1D2Q14995 579 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 LETM2Q2VYF4 491 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 GCNT6Q5T4J0 391 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 NDUFAF5Q5TEU4 345 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 PACS1Q6VY07 963 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
TRAV11-201ENST00000539512 KCTD8Q6ZWB6 473 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 Q75L30 129 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 ATG9AQ7Z3C6 839 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 SLC9B2Q86UD5 537 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 WDR20Q8TBZ3 569 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 CD101Q93033 1021 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 PRMT6Q96LA8 375 aaPredicted RBP6.36□□□□□ -1.39
TRAV11-201ENST00000539512 POLR3CQ9BUI4 534 aaPredicted RBP6.36□□□□□ -1.39
TRAV11-201ENST00000539512 FNDC11Q9BVV2 318 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 TRPC7Q9HCX4 862 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 NRBP1Q9UHY1 535 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 GRIP1Q9Y3R0 1128 aa6.36□□□□□ -1.39
TRAV11-201ENST00000539512 KCNAB3O43448 404 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 ADRB2P07550 413 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 MYBL1P10243 752 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 MCCP23508 829 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 EEF1DP29692 281 aaKnown RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 HOXA1P49639 335 aaPredicted RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 SNTB1Q13884 538 aaKnown RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 KRT80Q6KB66 452 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 KLC3Q6P597 504 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 MEPCEQ7L2J0 689 aaKnown RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 RBM23Q86U06 439 aaKnown RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 CEP57Q86XR8 500 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 NAGSQ8N159 534 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 SORCS1Q8WY21 1168 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 SMPDL3BQ92485 455 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 LRRC1Q9BTT6 524 aa6.35□□□□□ -1.39
TRAV11-201ENST00000539512 NFKBIL1Q9UBC1 381 aaPredicted RBP6.35□□□□□ -1.39
TRAV11-201ENST00000539512 A0A1W2PS18 150 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 TCRBV21S2A2A0A5A6 115 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 TRBC2A0A5B9 178 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 MED19A0JLT2 244 aaPredicted RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 PRAC2D3DTV9 90 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 C16orf97H3BN30 126 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 TULP2O00295 520 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 BUB3O43684 328 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 GPR137BO60478 399 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 PDE9AO76083 593 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 GGPS1O95749 300 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ATP1A1P05023 1023 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 H1F0P07305 194 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ZNF75DP51815 510 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 FUT6P51993 359 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 PITX1P78337 314 aaPredicted RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 CDK3Q00526 305 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 CBWD6Q4V339 395 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 CBWD3Q5JTY5 395 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 SIRPB2Q5JXA9 342 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ERMARDQ5T6L9 678 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 C9orf106Q8NAJ2 232 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 PPFIBP2Q8ND30 876 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 PAPD5Q8NDF8 572 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 RBM15BQ8NDT2 890 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 DMBX1Q8NFW5 382 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 EXD1Q8NHP7 514 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ZNF653Q96CK0 615 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 SPACA9Q96E40 222 aaPredicted RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ZNF583Q96ND8 569 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 MS4A10Q96PG2 267 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 OR6C1Q96RD1 312 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 EPYCQ99645 322 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 AP1M1Q9BXS5 423 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 UPF2Q9HAU5 1272 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 GDE1Q9NZC3 331 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 ANAPC2Q9UJX6 822 aa6.34□□□□□ -1.39
TRAV11-201ENST00000539512 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
TRAV11-201ENST00000539512 CAPN9O14815 690 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
TRAV11-201ENST00000539512 TFAP2AP05549 437 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 APOA4P06727 396 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 LIPFP07098 398 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 CSF2RAP15509 400 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 PFKFB1P16118 471 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 AMD1P17707 334 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 GM2AP17900 193 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 DNASE1P24855 282 aa6.33□□□□□ -1.4
TRAV11-201ENST00000539512 GABRA5P31644 462 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms