RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 THRBP10828 461 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 GPX6P59796 221 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 NAE1Q13564 534 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF846Q147U1 533 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 MSS51Q4VC12 460 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 PLEKHG4Q58EX7 1191 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CAPN13Q6MZZ7 669 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 S100ZQ8WXG8 99 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF317Q96PQ6 595 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF607Q96SK3 696 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ADI1Q9BV57 179 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 BCKDKO14874 412 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 NPHS1O60500 1241 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 MZT2BQ6NZ67 158 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 SATL1Q86VE3 508 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 FBXL18Q96ME1 805 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CLEC4MQ9H2X3 399 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 SFXN1Q9H9B4 322 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 SOHLH2Q9NX45 425 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 SLC7A8Q9UHI5 535 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 RGPD1P0DJD0 1748 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 OR51F1A6NGY5 319 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 PPEF2O14830 753 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TRMUO75648 421 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 PIGRP01833 764 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 DUSP3P51452 185 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 PRPF38BQ5VTL8 546 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CLEC20AQ6ZU45 233 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ARL5AQ9Y689 179 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 AP3D1O14617 1153 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 NDST2P52849 883 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ZNHIT3Q15649 155 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 SERPINA9Q86WD7 417 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 SLC34A3Q8N130 599 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF655Q8N720 491 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 MCFD2Q8NI22 146 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CENPNQ96H22 339 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 PCDHAC1Q9H158 963 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 IMP3Q9NV31 184 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ABI3Q9P2A4 366 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3DA0A087WVF3 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3EA0A087X179 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3KA0A087X1G2 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3FA6NER0 549 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CHURC1-FNTBB4DL54 471 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3LB9A6J9 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 GRM6O15303 877 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 UGT2B11O75310 529 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 SYPP08247 313 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3HP0C7X1 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 IL12AP29459 219 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CDH4P55283 916 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 LPIN1Q14693 890 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 LDLRAD1Q5T700 205 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3GQ6DHY5 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3CQ6IPX1 549 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 FUT10Q6P4F1 479 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CERS6Q6ZMG9 384 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TBC1D3Q8IZP1 549 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 OR52J3Q8NH60 311 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 OR10A6Q8NH74 314 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 TEX47Q8TBZ9 253 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 COQ10BQ9H8M1 238 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 MAT2BQ9NZL9 334 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 OR10H2O60403 315 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 CDK14O94921 469 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 RPL4P36578 427 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 ARRB1P49407 418 aaPredicted RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 POU5F1Q01860 360 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 KLHL12Q53G59 568 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 LIX1Q8N485 282 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 RBM4BQ9BQ04 359 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 RBM4Q9BWF3 364 aaKnown RBP14.37□□□□□ -0.11
CACNB1-206ENST00000539338 SH3GLB1Q9Y371 365 aa14.37□□□□□ -0.11
CACNB1-206ENST00000539338 BMP7P18075 431 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 SSR2P43308 183 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 CCNHP51946 323 aaPredicted RBP14.36□□□□□ -0.11
CACNB1-206ENST00000539338 MPPE1Q53F39 396 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 ARL10Q8N8L6 244 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 SMYD1Q8NB12 490 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 BORCS5Q969J3 196 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 COQ7Q99807 217 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 EBPLQ9BY08 206 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 PIGVQ9NUD9 493 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 ATXN10Q9UBB4 475 aa14.36□□□□□ -0.11
CACNB1-206ENST00000539338 ERVW-1Q9UQF0 538 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms