RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 TTC39CQ8N584 583 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 PLD5Q8N7P1 536 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 EXD3Q8N9H8 876 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 SCAIQ8N9R8 606 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 DNAAF1Q8NEP3 725 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 FGF11Q92914 225 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 SMARCE1Q969G3 411 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 ZNF347Q96SE7 839 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 GAD1Q99259 594 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 LGMNQ99538 433 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 MEIS3Q99687 375 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 PIP5K1AQ99755 562 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 CENPOQ9BU64 300 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 ANKEF1Q9NU02 776 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 FOXJ2Q9P0K8 574 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 SH3BP4Q9P0V3 963 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 LIMA1Q9UHB6 759 aaKnown RBP4.09□□□□□ -1.75
SNHG1-203ENST00000537024 PILRBQ9UKJ0 227 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 STX8Q9UNK0 236 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 TNFSF13BQ9Y275 285 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 KCNE2Q9Y6J6 123 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 SLC4A4Q9Y6R1 1079 aa4.09□□□□□ -1.75
SNHG1-203ENST00000537024 MYLKQ15746 1914 aa4.09□□□□□ -1.76
SNHG1-203ENST00000537024 TCRBV7S3A2A0A539 114 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 TCRBV5S1A1TA0A578 114 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 TTC36A6NLP5 189 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 C17orf100A8MU93 164 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 PTGES3LE9PB15 166 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 HNRNPCL1O60812 293 aaKnown RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 FCGR2AP12318 317 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 POU1F1P28069 291 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 CCND2P30279 289 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 FMO4P31512 558 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 ACTN2P35609 894 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 PTGER3P43115 390 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 NOVP48745 357 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 RARRES1P49788 294 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 HSD17B4P51659 736 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 CRYBB1P53674 252 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 MC1RQ01726 317 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 GOLGA8DPQ0D2H9 430 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 EFEMP1Q12805 493 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 CHAF1BQ13112 559 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 DUOXA1Q1HG43 343 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 EDRF1Q3B7T1 1238 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 AWAT1Q58HT5 328 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 ZNF667Q5HYK9 610 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 KIAA1614Q5VZ46 1190 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 LYSMD4Q5XG99 296 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 CDC73Q6P1J9 531 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 IL20RBQ6UXL0 311 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 GALNT5Q7Z7M9 940 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 NEK8Q86SG6 692 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 TADA2BQ86TJ2 420 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 RFX6Q8HWS3 928 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 ANKHD1Q8IWZ3 2542 aaKnown RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 SRRM1Q8IYB3 904 aaKnown RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 GPR65Q8IYL9 337 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 GPATCH11Q8N954 259 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 FAM47BQ8NA70 645 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 C11orf65Q8NCR3 313 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 SETD9Q8NE22 299 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 NAP1L5Q96NT1 182 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 INPP4AQ96PE3 977 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 TMEM175Q9BSA9 504 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 IFT27Q9BW83 186 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 NKIRAS2Q9NYR9 191 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 EHD2Q9NZN4 543 aa4.08□□□□□ -1.76
SNHG1-203ENST00000537024 CORO1CQ9ULV4 474 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-203ENST00000537024 NUP210Q8TEM1 1887 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-203ENST00000537024 PHLPP2Q6ZVD8 1323 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 A0A1W2PQM1 296 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 GSTTP1A0A1W2PQM5 241 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 hCG_1807616A0A1W2PRN6 198 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 GRID2IPA4D2P6 1211 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 POC1B-GALNT4F8VUJ3 575 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 VILLO15195 856 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 CHADO15335 359 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 TGFB1I1O43294 461 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 TACC1O75410 805 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 DDHD2O94830 711 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 PDHBP11177 359 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 PORP16435 677 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-203ENST00000537024 ITGB6P18564 788 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 TACR3P29371 465 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 IDUAP35475 653 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 CPOXP36551 454 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 PPARGP37231 505 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-203ENST00000537024 DCTP40126 519 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 PTPN9P43378 593 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 CYP2J2P51589 502 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 SNX16P57768 344 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 TFAP4Q01664 338 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 RHAGQ02094 409 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 FCHO2Q0JRZ9 810 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 TMEM115Q12893 351 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-203ENST00000537024 MTA1Q13330 715 aa4.07□□□□□ -1.76
SNHG1-203ENST00000537024 SEMA3AQ14563 771 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms