RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SRSF1Q07955 248 aaKnown RBP eCLIP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 LONRF2Q1L5Z9 754 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 COLEC12Q5KU26 742 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FNBP1LQ5T0N5 605 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 BPHLQ86WA6 291 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ZNF398Q8TD17 642 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ZNF514Q96K75 400 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FCRL4Q96PJ5 515 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 GOLPH3Q9H4A6 298 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 LHX9Q9NQ69 397 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 IMP3Q9NV31 184 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 SMOXQ9NWM0 555 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PCDHGA6Q9Y5G7 932 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RP1L1Q8IWN7 2480 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CDC14CA4D256 554 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MKRN2OSH3BPM6 223 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CREG1O75629 220 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MTHFD1P11586 935 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FOLR1P15328 257 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PBLDP30039 288 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ARL4DP49703 201 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ACY1Q03154 408 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 XRCC4Q13426 336 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 DNASE1L3Q13609 305 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 IGFBP7Q16270 282 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 METRNLQ641Q3 311 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 KMT5CQ86Y97 462 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RBM41Q96IZ5 413 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CD180Q99467 661 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MAP3K3Q99759 626 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TWSG1Q9GZX9 223 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TP53TG5Q9Y2B4 290 aa19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 SPTBN1Q01082 2364 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1B-204ENST00000536782 UBA6A0AVT1 1052 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PIPSLA2A3N6 862 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ANXA9O76027 345 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TIAF1O95411 115 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PRAMEF1O95521 474 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RECKO95980 971 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 AGTP01019 485 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FURINP09958 794 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MARCKSL1P49006 195 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 GEMP55040 296 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 KLRB1Q12918 225 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 KCNAB1Q14722 419 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PTPRCAPQ14761 206 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 DNTTIP2Q5QJE6 756 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PWWP2BQ6NUJ5 590 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 BBS12Q6ZW61 710 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 DET1Q7L5Y6 550 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 BEND7Q8N7W2 519 aaPredicted RBP19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CT55Q8WUE5 264 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 GBA3Q9H227 469 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 HRASLS2Q9NWW9 162 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ARL5AQ9Y689 179 aa19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CFAP20Q9Y6A4 193 aaKnown RBP19.23■□□□□ 0.67
TNFRSF1B-204ENST00000536782 KLHL33A6NCF5 533 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 OR5K3A6NET4 321 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MGAT4DA6NG13 374 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TLCD2A6NGC4 264 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C2orf81A6NN90 581 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C21orf140B9A014 251 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 H7C0C1 242 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 APOC4-APOC2K7ER74 178 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 APOC2P02655 101 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 EBLN1P0CF75 366 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 LPOP22079 712 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RBL1P28749 1068 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ATP5OP48047 213 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 HSD11B2P80365 405 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TBX2Q13207 712 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TAF1AQ15573 450 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ITPRIPL1Q6GPH6 555 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TCTN3Q6NUS6 607 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RNF214Q8ND24 703 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 OR2L2Q8NH16 312 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ZFPM2Q8WW38 1151 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C12orf66Q96MD2 445 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 INSM2Q96T92 566 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FERMT1Q9BQL6 677 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FICDQ9BVA6 458 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 HEMGNQ9BXL5 484 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 WWP1Q9H0M0 922 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FGF21Q9NSA1 209 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ACSL5Q9ULC5 683 aa19.22■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RFPL1O75677 317 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PMS2P54278 862 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CCDC181Q5TID7 509 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C11orf63Q6NUN7 778 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ARMC6Q6NXE6 501 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CERS6Q6ZMG9 384 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TMEM135Q86UB9 458 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 OOSP2Q86WS3 158 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 D2HGDHQ8N465 521 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 OR4K2Q8NGD2 314 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 SEC14L1Q92503 715 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ASB8Q9H765 288 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C10orf88Q9H8K7 445 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MED13Q9UHV7 2174 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms