RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SCARB2	Q14108	478 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	C1QTNF12	Q5T7M4	302 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	PET117	Q6UWS5	81 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	ZBTB49	Q6ZSB9	765 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	TMPRSS12	Q86WS5	348 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	GBGT1	Q8N5D6	347 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	SEMA4D	Q92854	862 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	MIB2	Q96AX9	1013 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	PHF21A	Q96BD5	680 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	MTERF3	Q96E29	417 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	SPAG5	Q96R06	1193 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	C16orf70	Q9BSU1	422 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	SLC25A23	Q9BV35	468 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	DPP3	Q9NY33	737 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	RHCG	Q9UBD6	479 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	MALT1	Q9UDY8	824 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	VDAC3	Q9Y277	283 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710	YIPF1	Q9Y548	306 aa		5.23	□□□□□ -1.57
PRKDC-208	ENST00000536710		A0A0G2JPF8	293 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	PRSS51	A0A1B0GVH4	220 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	FAM90A10P	A6NDY2	464 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ANKUB1	A6NFN9	424 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	HNRNPCL3	B7ZW38	293 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	RECQL5	O94762	991 aa	Predicted RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	PMS2P2	O95744	297 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	BMP15	O95972	392 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	LINC00271	P0C7V0	271 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	HNRNPCL4	P0DMR1	293 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	IFNAR1	P17181	557 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ACHE	P22303	614 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	HSPA4	P34932	840 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	PSMC4	P43686	418 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	NPY4R	P50391	375 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	SLC20A2	Q08357	652 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	NFATC4	Q14934	902 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	NR1D2	Q14995	579 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	HYAL4	Q2M3T9	481 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	GCNT6	Q5T4J0	391 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	CAVIN1	Q6NZI2	390 aa	Known RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	PPP1R21	Q6ZMI0	780 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ERN2	Q76MJ5	926 aa	Known RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	C1QL2	Q7Z5L3	287 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	C1orf87	Q8N0U7	546 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	OR8H3	Q8N146	312 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	IQUB	Q8NA54	791 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ZNF114	Q8NC26	417 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	SPATA22	Q8NHS9	363 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	CDCA5	Q96FF9	252 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	OXNAD1	Q96HP4	312 aa	Predicted RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	CAMK1G	Q96NX5	476 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	SLC22A12	Q96S37	553 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	SEPHS2	Q99611	448 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ABHD6	Q9BV23	337 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	TCP11L1	Q9NUJ3	509 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	MIOS	Q9NXC5	875 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	WNT16	Q9UBV4	365 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	OR2W1	Q9Y3N9	320 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.22	□□□□□ -1.57	3e-6	■□□□□ 8.5
PRKDC-208	ENST00000536710	ASTN2	O75129	1339 aa	Predicted RBP	5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	ZNF541	Q9H0D2	1346 aa		5.22	□□□□□ -1.57
PRKDC-208	ENST00000536710	C15orf62	A8K5M9	175 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	HEPACAM2	A8MVW5	462 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	BUD23	O43709	281 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	OAZ2	O95190	189 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	OR52Z1	P0C646	297 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	FCGR1A	P12314	374 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF12	P17014	697 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	CTNNA1	P35221	906 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	MTHFR	P42898	656 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	RBP5	P82980	135 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	RBPJ	Q06330	500 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	DLG1	Q12959	904 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	ZNF234	Q14588	700 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	PTPRCAP	Q14761	206 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.21	□□□□□ -1.58	3e-6	■■■■■ 30.6
PRKDC-208	ENST00000536710	VWC2	Q2TAL6	325 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	IRAK1BP1	Q5VVH5	260 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	OR7E24	Q6IFN5	339 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	TRNP1	Q6NT89	227 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	TRAT1	Q6PIZ9	186 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	DCLRE1A	Q6PJP8	1040 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	SUSD1	Q6UWL2	747 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	CREB3L2	Q70SY1	520 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710		Q75L30	129 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	DET1	Q7L5Y6	550 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	GOT1L1	Q8NHS2	421 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	ELP5	Q8TE02	316 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	TMEM255B	Q8WV15	326 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	NEUROG1	Q92886	237 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	SLAMF9	Q96A28	289 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	SPDL1	Q96EA4	605 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	ADGRG7	Q96K78	797 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	JAKMIP1	Q96N16	626 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	SFXN2	Q96NB2	322 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	CITED2	Q99967	270 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	WNT5B	Q9H1J7	359 aa		5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-208	ENST00000536710	DPAGT1	Q9H3H5	408 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms