RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PSG1P11464 419 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SRD5A1P18405 259 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CASTP20810 708 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SP100P23497 879 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 STX2P32856 288 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ICAM3P32942 547 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PPP3CCP48454 512 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM115Q12893 351 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 GRIK2Q13002 908 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CHAF1BQ13112 559 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CAPSQ13938 189 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ERV3-1Q14264 604 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FRG1Q14331 258 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 C15orf59Q2T9L4 293 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 DUSP28Q4G0W2 176 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FBXO43Q4G163 708 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 EPC2Q52LR7 807 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF667Q5HYK9 610 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FNBP1LQ5T0N5 605 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SNRNP48Q6IEG0 339 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PLEKHA7Q6IQ23 1121 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF425Q6IV72 752 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 IKBIPQ70UQ0 350 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ARMCX2Q7L311 632 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ASCL5Q7RTU5 278 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TBC1D1Q86TI0 1168 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 DSELQ8IZU8 1212 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TAGAPQ8N103 731 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PLD5Q8N7P1 536 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ACER1Q8TDN7 264 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FAM216AQ8WUB2 273 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SNRNP27Q8WVK2 155 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 VOPP1Q96AW1 172 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 MSI2Q96DH6 328 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 ARHGEF26Q96DR7 871 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FEM1CQ96JP0 617 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 OR1F2PQ96R84 312 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SEPT5Q99719 369 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FAM110AQ9BQ89 295 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SDF4Q9BRK5 362 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM204Q9BSN7 226 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TEX12Q9BXU0 123 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 NPFFR1Q9GZQ6 430 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 USP44Q9H0E7 712 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 GPR108Q9NPR9 543 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CYSLTR2Q9NS75 346 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 SLC6A13Q9NSD5 602 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 HAUS2Q9NVX0 235 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM51Q9NW97 253 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CWC15Q9P013 229 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 FBXO9Q9UK97 447 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 NFE2L3Q9Y4A8 694 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PSAT1Q9Y617 370 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 A3GALT2U3KPV4 340 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 MYO5AQ9Y4I1 1855 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 VPS13AQ96RL7 3174 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 KMT2BQ9UMN6 2715 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SCN10AQ9Y5Y9 1956 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 IGHV4-28A0A0C4DH34 117 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 KANSL1LA0AUZ9 987 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM202A6NGA9 273 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 EPOPA6NHQ4 379 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 LIPT2A6NK58 231 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 C5orf67F2Z3F1 127 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 IPO8O15397 1037 aaKnown RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 HCRTR2O43614 444 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 HS6ST1O60243 411 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 JRKO75564 520 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 VNN2O95498 520 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 CXCL10P02778 98 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 DAOP14920 347 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 HOXB8P17481 243 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 AGAP20933 346 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 C21orf33P30042 268 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 DCTDP32321 178 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 RFX5P48382 616 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 AMTP48728 403 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 METAP2P50579 478 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 TERF1P54274 439 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 P2RX3P56373 397 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SELENOVP59797 346 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 BEX3Q00994 111 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 EGR4Q05215 589 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 COASYQ13057 564 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 NAE1Q13564 534 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 CUL4AQ13619 759 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PKP1Q13835 747 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 WTAPQ15007 396 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 NONOQ15233 471 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PTGISQ16647 500 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SOWAHAQ2M3V2 549 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 ESCO2Q56NI9 601 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 TCEAL5Q5H9L2 206 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 COLEC12Q5KU26 742 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SIGIRRQ6IA17 410 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 KLHL35Q6PF15 583 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms