RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 APOBEC3BQ9UH17 382 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SCOCQ9UIL1 159 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SNX13Q9Y5W8 968 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 UBR3Q6ZT12 1888 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TCRBV7S3A2A0A539 114 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PI15O43692 258 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 LATS1O95835 1130 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 C5AR1P21730 350 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 EPHA3P29320 983 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 DUSP3P51452 185 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TBL3Q12788 808 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TDGQ13569 410 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 LAPTM5Q13571 262 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 GSTA3Q16772 222 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SLC9A4Q6AI14 798 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 OR4A15Q8NGL6 344 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 FIBINQ8TAL6 211 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ATOH1Q92858 354 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 REXO5Q96IC2 774 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 FAM83CQ9BQN1 747 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 KCNK4Q9NYG8 393 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 EIF2B4Q9UI10 523 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CCDC189A1A4V9 331 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SAP18O00422 153 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TMEM63AO94886 807 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 MAPK12P53778 367 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 BIKQ13323 160 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 POMZP3Q6PJE2 187 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ADGRG2Q8IZP9 1017 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ATG16L2Q8NAA4 619 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SLC35B2Q8TB61 432 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 NSMCE2Q96MF7 247 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RNF38Q9H0F5 515 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ARHGEF3Q9NR81 526 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SLC17A7Q9P2U7 560 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RAB21Q9UL25 225 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ERVK-11Q9UQG0 969 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TRAF6Q9Y4K3 522 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 MYH4Q9Y623 1939 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SCN2BO60939 215 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TRBC1P01850 177 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 KLK3P07288 261 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PREPP48147 710 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 C2orf80Q0P641 193 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TMEM115Q12893 351 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SIM2Q14190 667 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF234Q14588 700 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PDK4Q16654 411 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RAB6CQ53S08 254 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SPDYCQ5MJ68 293 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PRAMEF14Q5SWL7 426 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 EMC10Q5UCC4 262 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SULT1C3Q6IMI6 304 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CAPRIN2Q6IMN6 1127 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CRTC1Q6UUV9 634 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 GCNT7Q6ZNI0 430 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CHST14Q8NCH0 376 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CATSPER1Q8NEC5 780 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 NELL1Q92832 810 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 VPS33AQ96AX1 596 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TADA1Q96BN2 335 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 CEP295NLQ96MC4 621 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SLC25A23Q9BV35 468 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RAB6CQ9H0N0 254 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 DDX18Q9NVP1 670 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 MAT2BQ9NZL9 334 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ABI3Q9P2A4 366 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TAC3Q9UHF0 121 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 VPS4AQ9UN37 437 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 A8MUA0 341 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 B3GALT2O43825 422 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 TAS2R39P59534 338 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF155Q12901 538 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 LSM12Q3MHD2 195 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PUS10Q3MIT2 529 aaKnown RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PAQR3Q6TCH7 311 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 POMGNT2Q8NAT1 580 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 JPH3Q8WXH2 748 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 LRIG1Q96JA1 1093 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 OR2M4Q96R27 311 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 NDC1Q9BTX1 674 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 STRADBQ9C0K7 418 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 C3orf14Q9HBI5 128 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 SCHIP1Q9P0W5 487 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-230ENST00000532245 MAPRE3Q9UPY8 281 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 RAP2CQ9Y3L5 183 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 ACTL7AQ9Y615 435 aa7.85□□□□□ -1.15
CTNND1-230ENST00000532245 PHIPQ8WWQ0 1821 aa7.84□□□□□ -1.15
CTNND1-230ENST00000532245 FAM220BPB1ANY3 271 aa7.84□□□□□ -1.15
CTNND1-230ENST00000532245 SOCS5O75159 536 aa7.84□□□□□ -1.15
CTNND1-230ENST00000532245 APBB3O95704 486 aa7.84□□□□□ -1.15
CTNND1-230ENST00000532245 PDHA1P08559 390 aa7.84□□□□□ -1.15
CTNND1-230ENST00000532245 POLR2CP19387 275 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-230ENST00000532245 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms