RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 GNAZP19086 355 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 ENTPD1P49961 510 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 TRAF1Q13077 416 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 HNF4GQ14541 408 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 STRIP1Q5VSL9 837 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 ZNF449Q6P9G9 518 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 C15orf39Q6ZRI6 1047 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 MEPCEQ7L2J0 689 aaKnown RBP6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 TLK2Q86UE8 772 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 FAM219AQ8IW50 185 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 SLC5A8Q8N695 610 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 C7orf57Q8NEG2 295 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 WFIKKN2Q8TEU8 576 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 DNAAF4Q8WXU2 420 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 OTUB1Q96FW1 271 aaPredicted RBP6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 DPAGT1Q9H3H5 408 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 R3HDMLQ9H3Y0 253 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 CNIH4Q9P003 139 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 STK26Q9P289 416 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 RHCGQ9UBD6 479 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 ZNHIT2Q9UHR6 403 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 LOXL2Q9Y4K0 774 aa6.24□□□□□ -1.41
CAPRIN1-208ENST00000530008 A0A1W2PPQ1 181 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 A0A1W2PRV1 198 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 C19orf81C9J6K1 198 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 TNFRSF8P28908 595 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 RFX5P48382 616 aaPredicted RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 CD81P60033 236 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 LASP1Q14847 261 aaKnown RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 UGCGQ16739 394 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 AMZ1Q400G9 498 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 Q4G0T1 1027 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 Q6ZTK2 550 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 GPR180Q86V85 440 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 DZIP1Q86YF9 867 aaKnown RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 OIT3Q8WWZ8 545 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 RSPH1Q8WYR4 309 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 DNASE1L2Q92874 299 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 PDLIM5Q96HC4 596 aaKnown RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 FAM81BQ96LP2 452 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 AK8Q96MA6 479 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 ATP6V0BQ99437 205 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 CMKLR1Q99788 373 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 CPNE1Q99829 537 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 FNDC11Q9BVV2 318 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 MRPL44Q9H9J2 332 aaKnown RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 GOLGA2P5Q9HBQ8 144 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 HHATLQ9HCP6 504 aa6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 TUBA8Q9NY65 449 aaPredicted RBP6.23□□□□□ -1.41
CAPRIN1-208ENST00000530008 IGHV4-28A0A0C4DH34 117 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 GOLGA6L9A6NEM1 432 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 C5orf52A6NGY3 159 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 SLC33A1O00400 549 aaPredicted RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 VWA5AO00534 786 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 SOCS6O14544 535 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 GCNT3O95395 438 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 MOCS3O95396 460 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 OR2T7P0C7T2 308 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TCF4P15884 667 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TKTP29401 623 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 KCNJ1P48048 391 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 ASCL1P50553 236 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 CTSCP53634 463 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 POLR2LP62875 67 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 ASIC1P78348 528 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TROAPQ12815 778 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 CCDC158Q5M9N0 1113 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 FAM109BQ6ICB4 259 aaPredicted RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TYW3Q6IPR3 259 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 CHERPQ8IWX8 916 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 HEXDCQ8WVB3 486 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 SLC44A1Q8WWI5 657 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 ATP6V0A1Q93050 837 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TEKT1Q969V4 418 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 MIB2Q96AX9 1013 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 COQ8BQ96D53 544 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 SFXN2Q96NB2 322 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 FEVQ99581 238 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TMEM206Q9H813 350 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 TBC1D7Q9P0N9 293 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 MOSPD1Q9UJG1 213 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 ITGA11Q9UKX5 1188 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 RNF150Q9ULK6 438 aa6.22□□□□□ -1.41
CAPRIN1-208ENST00000530008 OR2M5A3KFT3 312 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 BECN2A8MW95 431 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 H0YGN5 161 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 MEIS2O14770 477 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 RTN2O75298 545 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 CH25HO95992 272 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 PNPP00491 289 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 LCATP04180 440 aa6.21□□□□□ -1.42
CAPRIN1-208ENST00000530008 CALRP27797 417 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms