RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 DET1Q7L5Y6 550 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 VSTM4Q8IW00 320 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 UBXN4Q92575 508 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 MIB2Q96AX9 1013 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 ZCCHC2Q9C0B9 1178 aaKnown RBP11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 ACTL8Q9H568 366 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 IMP3Q9NV31 184 aaKnown RBP11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.577e-8■■■■□ 24.6
NDUFS3-204ENST00000525378 HACD3Q9P035 362 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 RARRES3Q9UL19 164 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 DNMT3AQ9Y6K1 912 aaPredicted RBP11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 SHANK1Q9Y566 2161 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 FER1L5A0AVI2 2057 aa11.47□□□□□ -0.57
NDUFS3-204ENST00000525378 HECTD1Q9ULT8 2610 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 SEC16AO15027 2179 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 hCG_1818297A0A087WSY0 165 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 OR5K3A6NET4 321 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 TLCD2A6NGC4 264 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 CBFA2T2O43439 604 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 PSTPIP1O43586 416 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 MTHFD1P11586 935 aaKnown RBP11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 HLA-DPA1P20036 260 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 MARCKSL1P49006 195 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 PMS2P54278 862 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ACY1Q03154 408 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 MPP3Q13368 585 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 OLIG2Q13516 323 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 SEMA5AQ13591 1074 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 LAMB3Q13751 1172 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ITGA9Q13797 1035 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 FNBP1LQ5T0N5 605 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 METRNLQ641Q3 311 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 FBXO38Q6PIJ6 1188 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ASB18Q6ZVZ8 466 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 TEX19Q8NA77 164 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 P3H4Q92791 437 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ZNF514Q96K75 400 aaPredicted RBP11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 C12orf66Q96MD2 445 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 PPM1MQ96MI6 270 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 WWP1Q9H0M0 922 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 C10orf88Q9H8K7 445 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 FGF21Q9NSA1 209 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 INTUQ9ULD6 942 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 MAN2B2Q9Y2E5 1009 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 PKP3Q9Y446 797 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ALG6Q9Y672 507 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
NDUFS3-204ENST00000525378 COL12A1Q99715 3063 aa11.46□□□□□ -0.58
NDUFS3-204ENST00000525378 UBR5O95071 2799 aaPredicted RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 UBA6A0AVT1 1052 aaPredicted RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 C21orf140B9A014 251 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 STX7O15400 261 aaKnown RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 SGTAO43765 313 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 RECKO95980 971 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 AGTP01019 485 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 MSH3P20585 1137 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 AKT1P31749 480 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 TNNT3P45378 269 aaPredicted RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 ARCN1P48444 511 aaKnown RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 CD97P48960 835 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 KPNA2P52292 529 aaKnown RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 XRCC4Q13426 336 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 GPR19Q15760 415 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 CPZQ66K79 652 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 KLHL35Q6PF15 583 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 KMT5CQ86Y97 462 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 APLFQ8IW19 511 aaPredicted RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 D2HGDHQ8N465 521 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 LILRA3Q8N6C8 439 aaPredicted RBP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 OR4K2Q8NGD2 314 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 ZNF398Q8TD17 642 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 FCRL4Q96PJ5 515 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 QKIQ96PU8 341 aaKnown RBP eCLIP11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 VAT1Q99536 393 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 FICDQ9BVA6 458 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 SMOXQ9NWM0 555 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 HRASLS2Q9NWW9 162 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 FAM8A1Q9UBU6 413 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 RSPH14Q9UHP6 348 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 TFR2Q9UP52 801 aa11.45□□□□□ -0.58
NDUFS3-204ENST00000525378 OR6C74A6NCV1 312 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 MGAT4DA6NG13 374 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 DDX3YO15523 660 aaKnown RBP11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 PRAMEF1O95521 474 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 TPM1P09493 284 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 LPOP22079 712 aaPredicted RBP11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 RBL1P28749 1068 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 PTPN4P29074 926 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 ARL4DP49703 201 aa11.44□□□□□ -0.58
NDUFS3-204ENST00000525378 HADHBP55084 474 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms