RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 SLC15A1P46059 708 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 POLR2JP52435 117 aaKnown RBP9.64□□□□□ -0.87
KDM2A-204ENST00000524657 EFNA5P52803 228 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 TUBA1BP68363 451 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 TMEM132DQ14C87 1099 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 PRSS36Q5K4E3 855 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 ZNF678Q5SXM1 525 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 TUBA1AQ71U36 451 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 PODNQ7Z5L7 613 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 FAM126BQ8IXS8 530 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 SLC35F5Q8WV83 523 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
KDM2A-204ENST00000524657 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 ST6GAL2Q96JF0 529 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 TRNT1Q96Q11 434 aaKnown RBP9.64□□□□□ -0.87
KDM2A-204ENST00000524657 FSD1LQ9BXM9 530 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
KDM2A-204ENST00000524657 USE1Q9NZ43 259 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 DNMT3LQ9UJW3 386 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 KIAA1257Q9ULG3 409 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
KDM2A-204ENST00000524657 FAM92AA1XBS5 289 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 HAT1O14929 419 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 IMPDH1P20839 514 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 DNAJB13P59910 316 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 TOP3AQ13472 1001 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 LRRC26Q2I0M4 334 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CDONQ4KMG0 1287 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 LACC1Q8IV20 430 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 EID3Q8N140 333 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PPHLN1Q8NEY8 458 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 YIPF6Q96EC8 236 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RBM4Q9BWF3 364 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RERGLQ9H628 205 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 ZNF408Q9H9D4 720 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 TMLHEQ9NVH6 421 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 BPTFQ12830 3046 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SHROOM3Q8TF72 1996 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 A0A087X1B8 175 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 ARVCFO00192 962 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 AKR7A2O43488 359 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CYP2C8P10632 490 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PTGS2P35354 604 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 NUDT6P53370 316 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CBX2Q14781 532 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 NFE2Q16621 373 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 TYSND1Q2T9J0 566 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SLX4IPQ5VYV7 408 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 LRRC8DQ7L1W4 858 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 AMER2Q8N7J2 671 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PTERQ96BW5 349 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CCDC126Q96EE4 140 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 OR51E2Q9H255 320 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 EXOSC4Q9NPD3 245 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 TIGARQ9NQ88 270 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SDR39U1Q9NRG7 319 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 TMEM39AQ9NV64 488 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 NSMCE4AQ9NXX6 385 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 ZNF639Q9UID6 485 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 LEF1Q9UJU2 399 aaPredicted RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 DOCK5Q9H7D0 1870 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PABPN1LA6NDY0 278 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SUPT3HB4E1H0 165 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SMLR1H3BR10 107 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CYP11A1P05108 521 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 IGFBP5P24593 272 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 FCGRTP55899 365 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 ITKQ08881 620 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 DALRD3Q5D0E6 543 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PCID2Q5JVF3 399 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PAMR1Q6UXH9 720 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 HFE2Q6ZVN8 426 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 OSTM1Q86WC4 334 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RAB43Q86YS6 212 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RIMKLAQ8IXN7 391 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 SLC2A14Q8TDB8 520 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 RNF34Q969K3 372 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 LRRC3Q9BY71 257 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 MKRN2Q9H000 416 aaKnown RBP9.63□□□□□ -0.87
KDM2A-204ENST00000524657 MMP27Q9H306 513 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 ACOT13Q9NPJ3 140 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 PIGVQ9NUD9 493 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
KDM2A-204ENST00000524657 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 E5RI56 91 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 H3BUI4 141 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 CLDN5O00501 218 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 LMO2P25791 158 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 HECTD2Q5U5R9 776 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
KDM2A-204ENST00000524657 RGMBQ6NW40 437 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms