RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 OR10H2O60403 315 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ATG13O75143 517 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 BCAS2O75934 225 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 C1QL1O75973 258 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE7O76087 117 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DDNO94850 711 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LETM1O95202 739 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LUC7L3O95232 432 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PGLSO95336 258 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TRIM16O95361 564 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 VNN2O95498 520 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LDLRP01130 860 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 EGFP01133 1207 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GH1P01241 217 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CSN3P07498 182 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 FAM86B2P0C5J1 330 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE12FP0CL80 117 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE12GP0CL81 117 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE12IP0CL82 117 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SPP1P10451 314 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SAGP10523 405 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PCP11498 1178 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 EPCAMP16422 314 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 VCLP18206 1134 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ITIH1P19827 911 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 HOXA5P20719 270 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DNASE1P24855 282 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CD27P26842 260 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 HOXA11P31270 313 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 EIF2S3P41091 472 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 WNT5AP41221 380 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CRKLP46109 303 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 IER3P46695 156 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 RPL21P46778 160 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SLC9A3P48764 834 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GMPSP49915 693 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ZNF81P51508 661 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GPC3P51654 580 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LUMP51884 338 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ZNF131P52739 623 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 MFAP3P55082 362 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CTSWP56202 376 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 YBEYP58557 167 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SELENOVP59797 346 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SEC61BP60468 96 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ZP1P60852 638 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 HNRNPKP61978 463 aaKnown RBP eCLIP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DLK1P80370 383 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DGCR2P98153 550 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ID2Q02363 134 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GHRHRQ02643 423 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TFF2Q03403 129 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ARHGAP1Q07960 439 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 SLC10A2Q12908 348 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 FOXF2Q12947 444 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE1Q13065 139 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GAGE4Q13068 117 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TNK1Q13470 666 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CUL3Q13618 768 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LAMB3Q13751 1172 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 RABEP1Q15276 862 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TRADDQ15628 312 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 INPP5JQ15735 1006 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 EFNB3Q15768 340 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 AARDQ4LEZ3 155 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DNAJC21Q5F1R6 531 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 AKNAD1Q5T1N1 836 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GCNT6Q5T4J0 391 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 C12orf60Q5U649 245 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DUS1LQ6P1R4 473 aaKnown RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 NEK5Q6P3R8 708 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CASC4Q6P4E1 433 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 BRAT1Q6PJG6 821 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 FIGLAQ6QHK4 219 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TMEM270Q6UE05 265 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PARM1Q6UWI2 310 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 LINGO4Q6UY18 593 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ZNF793Q6ZN11 406 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TMEM182Q6ZP80 229 aaPredicted RBP1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 Q6ZPA2 131 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ZBTB49Q6ZSB9 765 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 TTLL10Q6ZVT0 673 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 MON1BQ7L1V2 547 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 KCTD9Q7L273 389 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PTF1AQ7RTS3 328 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ATG9AQ7Z3C6 839 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 MIER3Q7Z3K6 550 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ADCK1Q86TW2 530 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 NLRP14Q86W24 1093 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 ADGRG3Q86Y34 549 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PALB2Q86YC2 1186 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 GPSM1Q86YR5 675 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 VRK3Q8IV63 474 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 FOXRED2Q8IWF2 684 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 HSCBQ8IWL3 235 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 CNTN4Q8IWV2 1026 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 DSELQ8IZU8 1212 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 RASGEF1CQ8N431 466 aa1.29□□□□□ -2.2
RN7SKP88-201ENST00000516847 PCDH20Q8N6Y1 951 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms