RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 SMYD2Q9NRG4 433 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SDR39U1Q9NRG7 319 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TM7SF3Q9NS93 570 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ATAD3AQ9NVI7 634 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FAM120CQ9NX05 1096 aaKnown RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MIOSQ9NXC5 875 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GOLGA6AQ9NYA3 693 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LUZP4Q9P127 313 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ARMCX1Q9P291 453 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 OR14J1Q9UGF5 321 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LIMA1Q9UHB6 759 aaKnown RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BAIAP2L1Q9UHR4 511 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FBXL2Q9UKC9 423 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 POU2F3Q9UKI9 436 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GJD2Q9UKL4 321 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KLK13Q9UKR3 277 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ACAD8Q9UKU7 415 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 POMT2Q9UKY4 750 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BAG5Q9UL15 447 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ARHGAP26Q9UNA1 814 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A4GNTQ9UNA3 340 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CELA1Q9UNI1 258 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 VDAC3Q9Y277 283 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 EXOGQ9Y2C4 368 aaKnown RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF510Q9Y2H8 683 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PRG3Q9Y2Y8 225 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PTRH2Q9Y3E5 179 aaKnown RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C2CD2Q9Y426 696 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SRPRBQ9Y5M8 271 aaKnown RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SPIN1Q9Y657 262 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC4A4Q9Y6R1 1079 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CDC42BPBQ9Y5S2 1711 aa0.24□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NACAE9PAV3 2078 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PCDH11YQ9BZA8 1340 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IGLV3-10A0A075B6K4 115 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A0A087WWV3 80 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A0A0G2JNG1 304 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TRBV4-1A0A0J9YWV2 114 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MEIOCA2RUB1 952 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MTMR11A4FU01 709 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C3orf70A6NLC5 250 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 H3BMM5 538 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BLOC1S5-TXNDC5H3BN57 136 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 K7EM74 188 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 EBAG9O00559 213 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HNRNPDLO14979 420 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZBTB43O43298 467 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 OR10H2O60403 315 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SNAP91O60641 907 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TSC22D2O75157 780 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF253O75346 499 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TADA2AO75478 443 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SKAP2O75563 359 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RFPL2O75678 378 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CDC123O75794 336 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PSMD10O75832 226 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RSL1D1O76021 490 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RECQL5O94762 991 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SEMA4FO95754 770 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GLP2RO95838 553 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TBX18O95935 607 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MT-CYBP00156 380 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 F9P00740 461 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HLA-DQA2P01906 255 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TFRCP02786 760 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PRSS1P07477 247 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SPARCP09486 303 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CLTBP09497 229 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FAM106CPP0CH98 169 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 DLATP10515 647 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MMP9P14780 707 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GABRB1P18505 474 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GNAZP19086 355 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 POLR2CP19387 275 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IDSP22304 550 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 UGT1A1P22309 533 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CA4P22748 312 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ACADLP28330 430 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ADSSP30520 456 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HOXC8P31273 242 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IL2RGP31785 369 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ACSL1P33121 698 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TRIM23P36406 574 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PGM1P36871 562 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MMP12P39900 470 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ID1P41134 155 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HTR3AP46098 478 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GSK3BP49841 420 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MMP14P50281 582 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BMXP51813 675 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LUMP51884 338 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CASP6P55212 293 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NDUFV3P56181 108 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RPS3AP61247 264 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SNRPD1P62314 119 aaKnown RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CSNK2A1P68400 391 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMF1P82094 1093 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CDR2Q01850 454 aa0.23□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ICA1Q05084 483 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms