RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ARHGAP10A1A4S6 786 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 RGSL1A5PLK6 1076 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FOXO6A8MYZ6 492 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 HNRNPCL3B7ZW38 293 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PIK3R2O00459 728 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 AP3D1O14617 1153 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SHBGP04278 402 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ITGA2BP08514 1039 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 HNRNPCL4P0DMR1 293 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MDH1P40925 334 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ARPP19P56211 112 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PTK6Q13882 451 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CCDC142Q17RM4 750 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 AARDQ4LEZ3 155 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ANKRD20A8PQ5CZ79 823 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 KRBOX4Q5JUW0 171 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DENND2CQ68D51 928 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 GPR156Q8NFN8 814 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 BRIX1Q8TDN6 353 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 RAPGEF5Q92565 580 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DDX50Q9BQ39 737 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ITPAQ9BY32 194 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 AKTIPQ9H8T0 292 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 WDR6Q9NNW5 1121 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MRPS18AQ9NVS2 196 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DDIT4Q9NX09 232 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FTSJ1Q9UET6 329 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 RPS6KA6Q9UK32 745 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 INSL5Q9Y5Q6 135 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 KRT87PA6NCN2 255 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 STX16-NPEPL1H3BU86 382 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 STX16O14662 325 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PRRG1O14668 218 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TP73O15350 636 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TEX28O15482 410 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ATP6V1G1O75348 118 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ERAL1O75616 437 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 IGLV3-27P01718 113 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 APOEP02649 317 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 HEXBP07686 556 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ATF6P18850 670 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 FUT4P22083 530 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SERPINB6P35237 376 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SOX6P35712 828 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PBX3P40426 434 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SLC26A5P58743 744 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 COG7P83436 770 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SLC29A2Q14542 456 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PAFAH1B3Q15102 231 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 CDO1Q16878 200 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SYPL2Q5VXT5 272 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 KIAA0408Q6ZU52 694 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PLEKHM3Q6ZWE6 761 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TMCO2Q7Z6W1 182 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TAC4Q86UU9 113 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 RFX6Q8HWS3 928 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 FBXL6Q8N531 539 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 HSPH1Q92598 858 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PGLYRP2Q96PD5 576 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 MYOCQ99972 504 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PITHD1Q9GZP4 211 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ENTPD7Q9NQZ7 604 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 NSMCE4AQ9NXX6 385 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF212Q9UDV6 495 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ASIC3Q9UHC3 531 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 CAMK2AQ9UQM7 478 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF510Q9Y2H8 683 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 R3HDM2Q9Y2K5 976 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 MTCH2Q9Y6C9 303 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 A0A0C4DFX4 3053 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 CDH23Q9H251 3354 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 KCNU1A8MYU2 1149 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ADAM12O43184 909 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 LIASO43766 372 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 PRAMEF4O60810 478 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SEC24DO94855 1032 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 SEC24AO95486 1093 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 GLUD1P00367 558 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 LRG1P02750 347 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TROVE2P10155 538 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 HMGA1P17096 107 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 IVDP26440 423 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 ATP5C1P36542 298 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 KCNJ5P48544 419 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 VPS41P49754 854 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 VCPP55072 806 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 MAGOHP61326 146 aaKnown RBP7.07□□□□□ -1.28
CLCN3-206ENST00000507875 TAF10Q12962 218 aa7.07□□□□□ -1.28
CLCN3-206ENST00000507875 EFR3AQ14156 821 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms