RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CHST15Q7LFX5 561 aaPredicted RBP13.94□□□□□ -0.18
RNF4-208ENST00000507247 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 PHACTR4Q8IZ21 702 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 OR2L2Q8NH16 312 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 ELMO1Q92556 727 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 ARL8AQ96BM9 186 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 PGM2Q96G03 612 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 TMEM168Q9H0V1 697 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 CENPHQ9H3R5 247 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 FSCN3Q9NQT6 498 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
RNF4-208ENST00000507247 SMG5Q9UPR3 1016 aaKnown RBP13.94□□□□□ -0.18
RNF4-208ENST00000507247 ANKRD6Q9Y2G4 727 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 DHRS7Q9Y394 339 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 GPSM3Q9Y4H4 160 aa13.94□□□□□ -0.18
RNF4-208ENST00000507247 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
RNF4-208ENST00000507247 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 PRR19A6NJB7 356 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 F8W8V4 182 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 GOLGA8RI6L899 631 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 ATP8B1O43520 1251 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 RASGRP1O95267 797 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TNFP01375 233 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 C2P06681 752 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SLC35E2BP0CK96 405 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 NME1P15531 152 aaKnown RBP13.93□□□□□ -0.18
RNF4-208ENST00000507247 ZNF37AP17032 561 aaPredicted RBP13.93□□□□□ -0.18
RNF4-208ENST00000507247 TYK2P29597 1187 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 HOXD12P35452 270 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 IRF9Q00978 393 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 DNAJC3Q13217 504 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
RNF4-208ENST00000507247 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
RNF4-208ENST00000507247 GBX1Q14549 363 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TCEA2Q15560 299 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 DUOXA1Q1HG43 343 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 INSCQ1MX18 579 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 PPM1JQ5JR12 505 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 PAQR3Q6TCH7 311 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SH2D5Q6ZV89 423 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 AMZ2Q86W34 360 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 VRK3Q8IV63 474 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 CPNE9Q8IYJ1 553 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 ZBTB2Q8N680 514 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SUMF1Q8NBK3 374 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 CCL4L1Q8NHW4 92 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SKA1Q96BD8 255 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TSPAN17Q96FV3 270 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TIMM29Q9BSF4 260 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TSSK1BQ9BXA7 367 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 ARRDC1-AS1Q9H2J1 176 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 COG4Q9H9E3 785 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 POPDC3Q9HBV1 291 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 TRMT6Q9UJA5 497 aaKnown RBP13.93□□□□□ -0.18
RNF4-208ENST00000507247 CDYLQ9Y232 598 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 KCNK6Q9Y257 313 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 SNX11Q9Y5W9 270 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 DMDP11532 3685 aa13.93□□□□□ -0.18
RNF4-208ENST00000507247 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 A0A096LPK6 155 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 C17orf113A0A1B0GUU1 675 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 SLC5A10A0PJK1 596 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 GPC4O75487 556 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 SYF2O95926 243 aaKnown RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 TOP3BO95985 862 aaKnown RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 MT-ND3P03897 115 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CSF2P04141 144 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CFIP05156 583 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CELA2BP08218 269 aaPredicted RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 GSTM1P09488 218 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CREB1P16220 341 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 JUNDP17535 347 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 AK4P27144 223 aaPredicted RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 MPLP40238 635 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CCNFP41002 786 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 DPP6P42658 865 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 PREPP48147 710 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CTBSQ01459 385 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 GSTM4Q03013 218 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 DMPKQ09013 629 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 DLG1Q12959 904 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CCDC6Q16204 474 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 TTMPQ5BVD1 217 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 ACSBG2Q5FVE4 666 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 UGT3A1Q6NUS8 523 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 RAPH1Q70E73 1250 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 OTOAQ7RTW8 1153 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 NRROSQ86YC3 692 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 ANKRD49Q8WVL7 239 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 INPP5DQ92835 1189 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms