RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CA5AP35218 305 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 NSG1P42857 185 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 PPM1FP49593 454 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 CDKN1CP49918 316 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 ARSDP51689 593 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CRADDP78560 199 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CCL7P80098 99 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 GSTM4Q03013 218 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ACVR1Q04771 509 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CKAP4Q07065 602 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 DMPKQ09013 629 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TARDBPQ13148 414 aaKnown RBP eCLIP7.14□□□□□ -1.27
GYPB-206ENST00000506516 TUBB2AQ13885 445 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SPIDRQ14159 915 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ITIH4Q14624 930 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 NAA30Q147X3 362 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 KIR2DS5Q14953 304 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 LRRK1Q38SD2 2015 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 PLA2G4EQ3MJ16 856 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 BCL7AQ4VC05 210 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 C4orf17Q53FE4 359 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 PERM1Q5SV97 790 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 HES3Q5TGS1 186 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 AGAP9Q5VTM2 703 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ANKRD22Q5VYY1 191 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 MRNIPQ6NTE8 343 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ABRAXAS1Q6UWZ7 409 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 WASH2PQ6VEQ5 465 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CCNI2Q6ZMN8 369 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SDCCAG8Q86SQ7 713 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 CAND1Q86VP6 1230 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 HOOK3Q86VS8 718 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 C17orf82Q86X59 251 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 ZNF547Q8IVP9 402 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TRIM48Q8IWZ4 208 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CFAP206Q8IYR0 622 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SFRP1Q8N474 314 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 NAT8LQ8N9F0 302 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 Q8N9G6 341 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 BBOF1Q8ND07 529 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SPATA4Q8NEY3 305 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 OR13J1Q8NGT2 312 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 OR2L2Q8NH16 312 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CCDC74AQ96AQ1 378 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 LINC00615Q96LM1 132 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 C16orf45Q96MC5 204 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 ZNF778Q96MU6 729 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SERPINB12Q96P63 405 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 DEPDC7Q96QD5 511 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 GFM1Q96RP9 751 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 KRT12Q99456 494 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CCM2Q9BSQ5 444 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TUBB2BQ9BVA1 445 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 LRRN3Q9H3W5 708 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SYNDIG1Q9H7V2 258 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SARS2Q9NP81 518 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 ATP13A2Q9NQ11 1180 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 WASH6PQ9NQA3 447 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 PRDM8Q9NQV8 689 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SYBUQ9NX95 663 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 CPNE7Q9UBL6 633 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SLC23A2Q9UGH3 650 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SLC2A6Q9UGQ3 507 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ACSL5Q9ULC5 683 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 SOX13Q9UN79 622 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 WASF3Q9UPY6 502 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 RNF215Q9Y6U7 377 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 ASCC3Q8N3C0 2202 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 IGLV3-16A0A075B6K0 115 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 FAM237BA0A1B0GVD1 139 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 OR51F1A6NGY5 319 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 EFCAB8A8MWE9 144 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 FANCGO15287 622 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CD3EAPO15446 510 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 TTI1O43156 1089 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 NDUFS3O75489 264 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 TMEM63AO94886 807 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 VAPBO95292 243 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 VIPP01282 170 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 RPLP0P05388 317 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 OR56A5P0C7T3 313 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 XRCC1P18887 633 aaPredicted RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 SPINK2P20155 84 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 RPL10P27635 214 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 NMBRP28336 390 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 ALDH4A1P30038 563 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 PBLDP30039 288 aaPredicted RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 FOXN2P32314 431 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 FASLGP48023 281 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 TTPAP49638 278 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CTSCP53634 463 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 MAZP56270 477 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 GPLD1P80108 840 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 B4GALNT1Q00973 533 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 HHEXQ03014 270 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 POU4F2Q12837 409 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 MORF4L2Q15014 288 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms