RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PPIEQ9UNP9 301 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF148Q9UQR1 794 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 VDAC3Q9Y277 283 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 AMDHD2Q9Y303 409 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM184BQ9Y519 407 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PTPRCP08575 1304 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRAG1Q86YV5 1406 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GPR75-ASB3A0A0A6YYF3 556 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 A0A1W2PP11 408 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 LILRA5A6NI73 299 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TSPY2A6NKD2 308 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 HNRNPCL2B2RXH8 293 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF587BE7ETH6 402 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLK4O00444 970 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 CLGNO14967 610 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC16A5O15375 505 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 NDUFS4O43181 175 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 BAG2O95816 211 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 APOA4P06727 396 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TPOP07202 933 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ABCB1P08183 1280 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TSPY3P0CV98 308 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TSPY8P0CW00 308 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 DAOP14920 347 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GLULP15104 373 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ITGA2P17301 1181 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GJA1P17302 382 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCNA5P22460 613 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 MATR3P43243 847 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 AMPHP49418 695 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ARSEP51690 589 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 UBXN2AP68543 259 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TSPY1Q01534 308 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 RELQ04864 619 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 AIMP1Q12904 312 aaKnown RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNTA1Q13424 505 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 RASA2Q15283 850 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM35AQ53FP2 167 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 HECTD3Q5T447 861 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ALS2CLQ60I27 953 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADALQ6DHV7 355 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TRNP1Q6NT89 227 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GFRALQ6UXV0 394 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 RAD9BQ6WBX8 426 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF534Q76KX8 674 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 HAUS6Q7Z4H7 955 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 LDB1Q86U70 411 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SATL1Q86VE3 508 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SFR1Q86XK3 245 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GALNT13Q8IUC8 556 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 GUF1Q8N442 669 aaKnown RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 FBXO39Q8N4B4 442 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 POMGNT2Q8NAT1 580 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 POGLUT1Q8NBL1 392 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 CCDC191Q8NCU4 936 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TBC1D16Q8TBP0 767 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 AFAP1L1Q8TED9 768 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 PPP4R1Q8TF05 950 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 FIG4Q92562 907 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 CDCA5Q96FF9 252 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 BICD1Q96G01 975 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 VMP1Q96GC9 406 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 CDHR1Q96JP9 859 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SPATA17Q96L03 361 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF385AQ96PM9 386 aaKnown RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 MRPL1Q9BYD6 325 aaKnown RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 PPIL3Q9H2H8 161 aaKnown RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 LRMDAQ9H2I8 198 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 MMP27Q9H306 513 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCNK15Q9H427 330 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZWILCHQ9H900 591 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 UBTD1Q9HAC8 227 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAB2Q9NYJ8 693 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 MARCH4Q9P2E8 410 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 AMACRQ9UHK6 382 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 OR2W1Q9Y3N9 320 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCDHGB1Q9Y5G3 927 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 TRPV2Q9Y5S1 764 aa2.36□□□□□ -2.03
HMGB1P35-201ENST00000503360 SAA2-SAA4A0A096LPE2 208 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAGEA13PA6NCF6 341 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SMTNL1A8MU46 457 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAGEB17A8MXT2 336 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 H0YIN7 160 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM178BH3BS89 294 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNHIT1O43257 154 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CSPG5O95196 566 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SERPINB2P05120 415 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 VPREB1P12018 145 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 HLA-DOBP13765 273 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 POLR2CP19387 275 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 NR2F2P24468 414 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CAPZA2P47755 286 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CTSCP53634 463 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNRPEP62304 92 aaKnown RBP2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZBTB17Q13105 803 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 GTF2H2Q13888 395 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF234Q14588 700 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 KIF19Q2TAC6 998 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 CEP85LQ5SZL2 805 aa2.35□□□□□ -2.03
HMGB1P35-201ENST00000503360 IRAK1BP1Q5VVH5 260 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms