RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-210ENST00000498739 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CPNE7Q9UBL6 633 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 FAM169AQ9Y6X4 670 aa16.44■□□□□ 0.22
PRKCB-210ENST00000498739 A0A1W2PQM1 296 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 UBA6A0AVT1 1052 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 OR52A4PA6NMU1 304 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 F8W8V4 182 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 PRMT5O14744 637 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 PFDN6O15212 129 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 ZW10O43264 779 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 TTC4O95801 387 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 VIPP01282 170 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 XRCC1P18887 633 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 OGNP20774 298 aaKnown RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SLC19A1P41440 591 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 PPM1FP49593 454 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 OR1D5P58170 312 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SLC7A5Q01650 507 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 PDIA2Q13087 525 aaKnown RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SPIDRQ14159 915 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 CRYMQ14894 314 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 NR1D2Q14995 579 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 TYSND1Q2T9J0 566 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SPANXN3Q5MJ09 141 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 XKR5Q6UX68 686 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 IGDCC3Q8IVU1 814 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 MMGT1Q8N4V1 131 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 AVL9Q8NBF6 648 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 GPR150Q8NGU9 434 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 ELMO1Q92556 727 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SH3KBP1Q96B97 665 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 LRRC39Q96DD0 335 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 CFAP36Q96G28 342 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 GFM1Q96RP9 751 aaKnown RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 SLC38A3Q99624 504 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 WWP1Q9H0M0 922 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 COG4Q9H9E3 785 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 KCNK4Q9NYG8 393 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF624Q9P2J8 865 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-210ENST00000498739 ACSL5Q9ULC5 683 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 NEUROG3Q9Y4Z2 214 aa16.43■□□□□ 0.22
PRKCB-210ENST00000498739 B4GAT1O43505 415 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 GSTM1P09488 218 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 SLC35G4P0C7Q5 338 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ITGB6P18564 788 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 GPR3P46089 330 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 UBE2IP63279 158 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 SHC2P98077 582 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 GSTM4Q03013 218 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 BRD3Q15059 726 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 AMZ1Q400G9 498 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF470Q6ECI4 717 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 PTRHD1Q6GMV3 140 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF449Q6P9G9 518 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 RBM44Q6ZP01 1051 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 KCNMB4Q86W47 210 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 CILP2Q8IUL8 1156 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ANKMY2Q8IV38 441 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 UNC5BQ8IZJ1 945 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 CEP112Q8N8E3 955 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 C12orf66Q96MD2 445 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 DEPDC7Q96QD5 511 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 TCF12Q99081 682 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 WDR83Q9BRX9 315 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 TSSK1BQ9BXA7 367 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 P2RY12Q9H244 342 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 POT1Q9NUX5 634 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 IMP3Q9NV31 184 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ZC3H7BQ9UGR2 993 aaKnown RBP16.42■□□□□ 0.22
PRKCB-210ENST00000498739 GNPTGQ9UJJ9 305 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 TEX264Q9Y6I9 313 aa16.42■□□□□ 0.22
PRKCB-210ENST00000498739 ZFC3H1O60293 1989 aaKnown RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 IQCF5A8MTL0 148 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 NTN3O00634 580 aaPredicted RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 TCEA3O75764 348 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 RPS3P23396 243 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 PREPP48147 710 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 PLTPP55058 493 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CAV1Q03135 178 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.223e-7■■■□□ 19.1
PRKCB-210ENST00000498739 BOP1Q14137 746 aaKnown RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 RPE65Q16518 533 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 ZNF658BQ4V348 819 aaPredicted RBP16.41■□□□□ 0.22
PRKCB-210ENST00000498739 SYTL3Q4VX76 610 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 HSP90AA5PQ58FG0 334 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 NAPRTQ6XQN6 538 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 UNC5AQ6ZN44 842 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 CENPUQ71F23 418 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 LRRC6Q86X45 466 aa16.41■□□□□ 0.22
PRKCB-210ENST00000498739 DENND6AQ8IWF6 608 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms