RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 Q8N9G6 341 aaPredicted RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 OR10G6Q8NH81 332 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 HM13Q8TCT9 377 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SERPINB12Q96P63 405 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SLC38A3Q99624 504 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SYNDIG1Q9H7V2 258 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 POT1Q9NUX5 634 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SYBUQ9NX95 663 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SLC2A6Q9UGQ3 507 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 COL27A1Q8IZC6 1860 aaPredicted RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 A0A1W2PQM1 296 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 TRABD2BA6NFA1 517 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 LILRA5A6NI73 299 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 DNALI1O14645 258 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-254ENST00000497377 PFDN6O15212 129 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 B4GAT1O43505 415 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CPNE6O95741 557 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 VIPP01282 170 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 FTH1P02794 183 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 PROS1P07225 676 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 PBLDP30039 288 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CCKBRP32239 447 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 TTPAP49638 278 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 INHBCP55103 352 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CLDN6P56747 220 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CRADDP78560 199 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 RPA4Q13156 261 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 EIF3IQ13347 325 aaKnown RBP11.24□□□□□ -0.61
HLA-B-254ENST00000497377 MAP9Q49MG5 647 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 RNASEH2BQ5TBB1 312 aaKnown RBP11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CASC4Q6P4E1 433 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 JAMLQ86YT9 394 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM159Q96B96 161 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CXorf40BQ96DE9 158 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 TRIM44Q96DX7 344 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-254ENST00000497377 STRADBQ9C0K7 418 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 CATSPERZQ9NTU4 200 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 KCNK4Q9NYG8 393 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 FRYQ5TBA9 3013 aa11.24□□□□□ -0.61
HLA-B-254ENST00000497377 TRBV23OR9-2A0A075B6M9 112 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 IGHV1OR21-1A0A087WYE8 117 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 OR51F1A6NGY5 319 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 GOLGA8MH3BSY2 632 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 KIF2AO00139 706 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CD3EAPO15446 510 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 DUX1O43812 170 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SLC35G4P0C7Q5 338 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 BRAFP15056 766 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 RPL10P27635 214 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 NMBRP28336 390 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CD1CP29017 333 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 TERF1P54274 439 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 OR1D5P58170 312 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 PLOD1Q02809 727 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 ZFP36L1Q07352 338 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 NFE2L1Q14494 772 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SEPT7Q16181 437 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 RNF187Q5TA31 235 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 IZUMO3Q5VZ72 239 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 KIAA0930Q6ICG6 404 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 MRNIPQ6NTE8 343 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 MAATS1Q7Z4T9 603 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SDCCAG8Q86SQ7 713 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM135Q86UB9 458 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 LRRC6Q86X45 466 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 LSMEM2Q8N112 164 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CLDN19Q8N6F1 224 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 KDF1Q8NAX2 398 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SPATA4Q8NEY3 305 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 OR4D9Q8NGE8 314 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 ZFPM2Q8WW38 1151 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 MFSD3Q96ES6 412 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 LIN37Q96GY3 246 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 AHCYL2Q96HN2 611 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CNTNAP3BQ96NU0 1288 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 TCF12Q99081 682 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 NAT9Q9BTE0 207 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 TSSK1BQ9BXA7 367 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CNTNAP3Q9BZ76 1288 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CCDC86Q9H6F5 360 aaKnown RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 SCHIP1Q9P0W5 487 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF624Q9P2J8 865 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-254ENST00000497377 ENTPD2Q9Y5L3 495 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 HEBP2Q9Y5Z4 205 aa11.23□□□□□ -0.61
HLA-B-254ENST00000497377 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 LIN7AO14910 233 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 AVILO75366 819 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 USP1O94782 785 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 VAPBO95292 243 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms