RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GUCA1BQ9UMX6 200 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 KCTD3Q9Y597 815 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 PCDHGA4Q9Y5G9 962 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 IGLV3-16A0A075B6K0 115 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 A8MU76 341 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 EFSO43281 561 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 ITGB2P05107 769 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 CCDC175P0C221 793 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 SLC35G4P0C7Q5 338 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 MTHFD1P11586 935 aaKnown RBP15.4■□□□□ 0.06
HDAC4-213ENST00000496347 TYRP1P17643 537 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 AMD1P17707 334 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 PBLDP30039 288 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-213ENST00000496347 RPE65Q16518 533 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 ANKS6Q68DC2 871 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 KLHL35Q6PF15 583 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 FAM83HQ6ZRV2 1179 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-213ENST00000496347 DET1Q7L5Y6 550 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 VASH2Q86V25 355 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 SLC13A5Q86YT5 568 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-213ENST00000496347 ZSCAN1Q8NBB4 408 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 GPR150Q8NGU9 434 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 RSC1A1Q92681 617 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 ZDHHC12Q96GR4 267 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 TGM7Q96PF1 710 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 RAB33BQ9H082 229 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 VPS37BQ9H9H4 285 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 EPHA6Q9UF33 1036 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
HDAC4-213ENST00000496347 TRBV5-4A0A0C4DH59 114 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 CAPN5O15484 640 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-213ENST00000496347 ACRV1P26436 265 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 MC4RP32245 332 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 FDFT1P37268 417 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 COL9A2Q14055 689 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-213ENST00000496347 SEPT6Q14141 434 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 POU6F1Q14863 301 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 HM13Q8TCT9 377 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 STYXQ8WUJ0 223 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 ZFPM2Q8WW38 1151 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 NKD1Q969G9 470 aa15.39■□□□□ 0.05
HDAC4-213ENST00000496347 IMP3Q9NV31 184 aaKnown RBP15.39■□□□□ 0.05
HDAC4-213ENST00000496347 NLE1Q9NVX2 485 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-213ENST00000496347 MROH6A6NGR9 719 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 SGTAO43765 313 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 NRDCO43847 1150 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 RASSF9O75901 435 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 C1QL1O75973 258 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 GAS8O95995 478 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 GSTM1P09488 218 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 ATP1B2P14415 290 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-213ENST00000496347 PSMA3P25788 255 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 TMPRSS15P98073 1019 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 GSTM4Q03013 218 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 CACNG1Q06432 222 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 SRSF6Q13247 344 aaKnown RBP15.38■□□□□ 0.05
HDAC4-213ENST00000496347 LAMB3Q13751 1172 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 PLCL1Q15111 1095 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 RPS6KA1Q15418 735 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 KIAA1614Q5VZ46 1190 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 IL22RA1Q8N6P7 574 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 CD180Q99467 661 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 ZDHHC3Q9NYG2 299 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 PILRAQ9UKJ1 303 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 PSMD13Q9UNM6 376 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 ZKSCAN5Q9Y2L8 839 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 HEBP2Q9Y5Z4 205 aa15.38■□□□□ 0.05
HDAC4-213ENST00000496347 C17orf113A0A1B0GUU1 675 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 CCL22O00626 93 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 POLR1CO15160 346 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-213ENST00000496347 RAD1O60671 282 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 SUN1O94901 812 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 IFNB1P01574 187 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 LEPRP48357 1165 aaKnown RBP15.37■□□□□ 0.05
HDAC4-213ENST00000496347 C19orf57Q0VDD7 668 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 CDH17Q12864 832 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 MAP7Q14244 749 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 IL11RAQ14626 422 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 IRGCQ6NXR0 463 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 XKR5Q6UX68 686 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 CACNA2D3Q8IZS8 1091 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 NLGN4XQ8N0W4 816 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 CCDC89Q8N998 374 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 NLGN4YQ8NFZ3 816 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-213ENST00000496347 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 C12orf66Q96MD2 445 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 CCM2Q9BSQ5 444 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 WWP1Q9H0M0 922 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 TRIT1Q9H3H1 467 aaKnown RBP15.37■□□□□ 0.05
HDAC4-213ENST00000496347 KIR3DX1Q9H7L2 352 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 LZTFL1Q9NQ48 299 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 ZNF148Q9UQR1 794 aa15.37■□□□□ 0.05
HDAC4-213ENST00000496347 TMEM184BQ9Y519 407 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-213ENST00000496347 HEATR9A2RTY3 570 aa15.36■□□□□ 0.05
HDAC4-213ENST00000496347 TLCD2A6NGC4 264 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms