RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PMEPA1Q969W9 287 aa23.73■■□□□ 1.39
HLA-C-209ENST00000495835 COPS8Q99627 209 aa23.73■■□□□ 1.39
HLA-C-209ENST00000495835 TRIT1Q9H3H1 467 aaKnown RBP23.73■■□□□ 1.39
HLA-C-209ENST00000495835 ZNF768Q9H5H4 540 aaKnown RBP23.73■■□□□ 1.39
HLA-C-209ENST00000495835 NLE1Q9NVX2 485 aaPredicted RBP23.73■■□□□ 1.39
HLA-C-209ENST00000495835 PILRAQ9UKJ1 303 aa23.73■■□□□ 1.39
HLA-C-209ENST00000495835 TRBV5-4A0A0C4DH59 114 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 TCRBV7S2A1N4TA0A589 114 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 POLR1CO15160 346 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 TYRP1P17643 537 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 PSMA3P25788 255 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 MAP4P27816 1152 aaKnown RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 GDF10P55107 478 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 GFERP55789 205 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 OASLQ15646 514 aaKnown RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 CYB5D1Q6P9G0 228 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 FAM83HQ6ZRV2 1179 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 IL22RA1Q8N6P7 574 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 CCM2Q9BSQ5 444 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 SIDT1Q9NXL6 827 aaKnown RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 SEMA5BQ9P283 1151 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 KLHL3Q9UH77 587 aa23.72■■□□□ 1.39
HLA-C-209ENST00000495835 TMEM184BQ9Y519 407 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-209ENST00000495835 IGLV3-16A0A075B6K0 115 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 LIASO43766 372 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 GSTM1P09488 218 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 MTHFD1P11586 935 aaKnown RBP23.71■■□□□ 1.39
HLA-C-209ENST00000495835 ATP1B2P14415 290 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-209ENST00000495835 FDFT1P37268 417 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 PRLHRP49683 370 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 GSTM4Q03013 218 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 LAMB3Q13751 1172 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 IL11RAQ14626 422 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 MEI1Q5TIA1 1274 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 KIAA1614Q5VZ46 1190 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 SLC13A5Q86YT5 568 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-209ENST00000495835 CACNA2D3Q8IZS8 1091 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 KLHL6Q8WZ60 621 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 TGM7Q96PF1 710 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 ZDHHC3Q9NYG2 299 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 PSMD13Q9UNM6 376 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 PCDHGA4Q9Y5G9 962 aa23.71■■□□□ 1.39
HLA-C-209ENST00000495835 SGTAO43765 313 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 RAD1O60671 282 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 MC4RP32245 332 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 MAP7Q14244 749 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 RPS6KA1Q15418 735 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 DET1Q7L5Y6 550 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 VASH2Q86V25 355 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 HM13Q8TCT9 377 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 RSC1A1Q92681 617 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 CDKN2AIPNLQ96HQ2 116 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 ALS2CR12Q96Q35 445 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 EFHD1Q9BUP0 239 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 VPS37BQ9H9H4 285 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 HEBP2Q9Y5Z4 205 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 COLEC10Q9Y6Z7 277 aa23.7■■□□□ 1.38
HLA-C-209ENST00000495835 CFAP46Q8IYW2 2715 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 MROH6A6NGR9 719 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 C1QL1O75973 258 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 GAS8O95995 478 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 SLC35G4P0C7Q5 338 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 ACRV1P26436 265 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 NDUFS1P28331 727 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 TMPRSS15P98073 1019 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 CDH17Q12864 832 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 SKIDA1Q1XH10 827 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 NLGN4XQ8N0W4 816 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 NLGN4YQ8NFZ3 816 aaPredicted RBP23.69■■□□□ 1.38
HLA-C-209ENST00000495835 UBXN4Q92575 508 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 MED8Q96G25 268 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 DNAJC1Q96KC8 554 aaKnown RBP23.69■■□□□ 1.38
HLA-C-209ENST00000495835 INSM2Q96T92 566 aaPredicted RBP23.69■■□□□ 1.38
HLA-C-209ENST00000495835 CD180Q99467 661 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 BAHCC1Q9P281 2608 aa23.69■■□□□ 1.38
HLA-C-209ENST00000495835 QSOX1O00391 747 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 RASSF9O75901 435 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 SUN1O94901 812 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 PRB1P04280 392 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 CCDC175P0C221 793 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 TPH1P17752 444 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 PBLDP30039 288 aaPredicted RBP23.68■■□□□ 1.38
HLA-C-209ENST00000495835 CACNG1Q06432 222 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 ABHD18Q0P651 414 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 SRSF6Q13247 344 aaKnown RBP23.68■■□□□ 1.38
HLA-C-209ENST00000495835 CACHD1Q5VU97 1274 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 CAPRIN2Q6IMN6 1127 aaKnown RBP23.68■■□□□ 1.38
HLA-C-209ENST00000495835 CARFQ8N187 725 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 ZNF843Q8N446 348 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 GPR150Q8NGU9 434 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 ATG4AQ8WYN0 398 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 C12orf66Q96MD2 445 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 WWP1Q9H0M0 922 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 IMP3Q9NV31 184 aaKnown RBP23.68■■□□□ 1.38
HLA-C-209ENST00000495835 RIMKLBQ9ULI2 386 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 ZNF148Q9UQR1 794 aa23.68■■□□□ 1.38
HLA-C-209ENST00000495835 AP2A2O94973 939 aa23.67■■□□□ 1.38
HLA-C-209ENST00000495835 LEPRP48357 1165 aaKnown RBP23.67■■□□□ 1.38
HLA-C-209ENST00000495835 RPA4Q13156 261 aa23.67■■□□□ 1.38
HLA-C-209ENST00000495835 POU6F1Q14863 301 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms