RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 AGAP9Q5VTM2 703 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 METRNLQ641Q3 311 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ABRAXAS1Q6UWZ7 409 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 WASH2PQ6VEQ5 465 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 KCNMB4Q86W47 210 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CCDC25Q86WR0 208 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CILP2Q8IUL8 1156 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 SFTPA2Q8IWL1 248 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 PALM2Q8IXS6 379 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 AGGF1Q8N302 714 aaeCLIP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 SFRP1Q8N474 314 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 Q8N9G6 341 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 NOA1Q8NC60 698 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 FBXO36Q8NEA4 188 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 SLC37A2Q8TED4 501 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 PYROXD1Q8WU10 500 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ELMO1Q92556 727 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ART4Q93070 314 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CXorf40BQ96DE9 158 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 PANX3Q96QZ0 392 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 SLC38A3Q99624 504 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ZMYND15Q9H091 742 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CCDC68Q9H2F9 335 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 EPB41L5Q9HCM4 733 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 SARS2Q9NP81 518 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 WASH6PQ9NQA3 447 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 INTS10Q9NVR2 710 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 CPNE7Q9UBL6 633 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 PSMD13Q9UNM6 376 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 TEX264Q9Y6I9 313 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 PRSS21Q9Y6M0 314 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
CSNK1E-213ENST00000495232 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 ESPNB1AK53 854 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 H3BMM5 538 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 IFRD1O00458 451 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 LIN7AO14910 233 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 TP73O15350 636 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 OPA1O60313 960 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 ADRB1P08588 477 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 JUPP14923 745 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 XRCC1P18887 633 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 ALDH4A1P30038 563 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 GPR3P46089 330 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 FASLGP48023 281 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 PLOD1Q02809 727 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 RPA4Q13156 261 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 BOP1Q14137 746 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 SPIDRQ14159 915 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 KRT33BQ14525 404 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 TYSND1Q2T9J0 566 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 FAM83HQ6ZRV2 1179 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 CEP128Q6ZU80 1094 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 C17orf82Q86X59 251 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 IGDCC3Q8IVU1 814 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 CHCHD4Q8N4Q1 142 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 GSDMBQ8TAX9 411 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 FBXO25Q8TCJ0 367 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 CERS2Q96G23 380 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 FOXP3Q9BZS1 431 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 WWP1Q9H0M0 922 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 COG4Q9H9E3 785 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 IARS2Q9NSE4 1012 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 MTRF1LQ9UGC7 380 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 CRYL1Q9Y2S2 319 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 PCDHB1Q9Y5F3 818 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 HEBP2Q9Y5Z4 205 aa11.85□□□□□ -0.51
CSNK1E-213ENST00000495232 PIKFYVEQ9Y2I7 2098 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 A6NCN8 305 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 OR52A4PA6NMU1 304 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 E5RI56 91 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 E7ESA3 106 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 KPNA5O15131 536 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 PPM1DO15297 605 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 DKK1O94907 266 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 ESR1P03372 595 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 ERVK-10P10266 1014 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 ITGB6P18564 788 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 RPS3P23396 243 aaKnown RBP eCLIP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 FMO4P31512 558 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 SLC1A2P43004 574 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 CTBP1Q13363 440 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 CLCA4Q14CN2 919 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 BRD3Q15059 726 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 TMED2Q15363 201 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 HES3Q5TGS1 186 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 RAB44Q7Z6P3 723 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 TMPRSS12Q86WS5 348 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 ASZ1Q8WWH4 475 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms