RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IMP3Q9NV31 184 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TRMT1Q9NXH9 659 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TMEM9Q9P0T7 183 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 FAM8A1Q9UBU6 413 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TTC7AQ9ULT0 858 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 WDR37Q9Y2I8 494 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 ZFC3H1O60293 1989 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 BPTFQ12830 3046 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 ACACAQ13085 2346 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 IGLV3-16A0A075B6K0 115 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 PSMA3P25788 255 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 NSG1P42857 185 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 TMPRSS3P57727 454 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 RAB15P59190 212 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 PRAMEP78395 509 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 GPR18Q14330 331 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 KRT33BQ14525 404 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 ITIH4Q14624 930 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 PLCL1Q15111 1095 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 CERS6Q6ZMG9 384 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 FAM83HQ6ZRV2 1179 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-211ENST00000494800 FAM129CQ86XR2 697 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 SLC35F6Q8N357 371 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 OR6P1Q8NGX9 317 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 USP7Q93009 1102 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 MAGOHBQ96A72 148 aaKnown RBP17.28■□□□□ 0.36
HDAC4-211ENST00000494800 ZDHHC12Q96GR4 267 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 TAAR9Q96RI9 348 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 ASPSCR1Q9BZE9 553 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 IL22Q9GZX6 179 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 WWP1Q9H0M0 922 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 SMARCAL1Q9NZC9 954 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 BFARQ9NZS9 450 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 KLHL3Q9UH77 587 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 ACSL6Q9UKU0 697 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 TCAF1Q9Y4C2 921 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 PCDHB11Q9Y5F2 797 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 HEBP2Q9Y5Z4 205 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 COLEC10Q9Y6Z7 277 aa17.28■□□□□ 0.36
HDAC4-211ENST00000494800 PRAMEF33A0A0G2JMD5 474 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 A8MU76 341 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 PRAMEF10O60809 474 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 MTHFD1P11586 935 aaKnown RBP17.27■□□□□ 0.36
HDAC4-211ENST00000494800 TYRP1P17643 537 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 NDUFS1P28331 727 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 GRIA1P42261 906 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 CAPZBP47756 277 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 NPY2RP49146 381 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 CDKN1CP49918 316 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-211ENST00000494800 SESN2P58004 480 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-211ENST00000494800 AARS2Q5JTZ9 985 aaKnown RBP17.27■□□□□ 0.36
HDAC4-211ENST00000494800 PCID2Q5JVF3 399 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 PDZD3Q86UT5 571 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 ZFPM2Q8WW38 1151 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 HDAC10Q969S8 669 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 C12orf66Q96MD2 445 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 OSBPL9Q96SU4 736 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 SLC39A1Q9NY26 324 aa17.27■□□□□ 0.36
HDAC4-211ENST00000494800 MN1Q10571 1320 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 PKD1L2Q7Z442 2459 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 URB1O60287 2271 aaKnown RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 CCDC162PA2VCL2 907 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 EFCAB7A8K855 629 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 B4E171 279 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 CES2O00748 559 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TOX3O15405 576 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 FTH1P02794 183 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 POLBP06746 335 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 LIPCP11150 499 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 CCL4P13236 92 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TPSB2P20231 275 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 ETV5P41161 510 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TSPAN7P41732 249 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 ARSDP51689 593 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TPSAB1Q15661 275 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 DBN1Q16643 649 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 FASTKD1Q53R41 847 aaKnown RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 DCAF12Q5T6F0 453 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 PACS1Q6VY07 963 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 ARHGAP22Q7Z5H3 698 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 PIANPQ8IYJ0 282 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 OR13J1Q8NGT2 312 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 OR4L1Q8NH43 312 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 ACTRT1Q8TDG2 376 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 GRK7Q8WTQ7 553 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 MS4A14Q96JA4 679 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TGM7Q96PF1 710 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TEFMQ96QE5 360 aaKnown RBP17.26■□□□□ 0.35
HDAC4-211ENST00000494800 DDA1Q9BW61 102 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 TSSK1BQ9BXA7 367 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 AP1M1Q9BXS5 423 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 PCDHGA3Q9Y5H0 932 aa17.26■□□□□ 0.35
HDAC4-211ENST00000494800 UNC13CQ8NB66 2214 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 OR51F1A6NGY5 319 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms