RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SREK1Q8WXA9 508 aaKnown RBP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 CLDN23Q96B33 292 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 ACSS2Q9NR19 701 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 RNF112Q9ULX5 631 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 SIT1Q9Y3P8 196 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 F8W8V4 182 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TRIM13O60858 407 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TGDSO95455 350 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TROVE2P10155 538 aaKnown RBP eCLIP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TRIM23P36406 574 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 SF3A3Q12874 501 aaKnown RBP eCLIP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 MTAPQ13126 283 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 YTHDF3Q7Z739 585 aaKnown RBP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TRIM69Q86WT6 500 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 MYO1HQ8N1T3 1032 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 STAG3L4Q8TBR4 150 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 RLN3Q8WXF3 142 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 MOCOSQ96EN8 888 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TOE1Q96GM8 510 aaKnown RBP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 PDLIM5Q96HC4 596 aaKnown RBP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 C7orf26Q96N11 449 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 ATOH8Q96SQ7 321 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 TEX101Q9BY14 249 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 ZNF395Q9H8N7 513 aaPredicted RBP20.27■□□□□ 0.84
KPNA1-210ENST00000494339 CYP4F12Q9HCS2 524 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 KLHL14Q9P2G3 628 aa20.27■□□□□ 0.84
KPNA1-210ENST00000494339 BDP1A6H8Y1 2624 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 KERAO60938 352 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 IGLV3-19P01714 112 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 GRK2P25098 689 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 LIPMQ5VYY2 423 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 CRTC3Q6UUV7 619 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 SPEM1Q8N4L4 309 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 CCM2Q9BSQ5 444 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 KLHL42Q9P2K6 505 aa20.26■□□□□ 0.83
KPNA1-210ENST00000494339 UBXN8O00124 270 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 VEGFDO43915 354 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 SERPINE1P05121 402 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 ATP5F1P24539 256 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 IFT88Q13099 833 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 STX3Q13277 289 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 VRK3Q8IV63 474 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 PHF21BQ96EK2 531 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 EPHX3Q9H6B9 360 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 C6orf106Q9H6K1 298 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 PHPT1Q9NRX4 125 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 PRKAB1Q9Y478 270 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 A8MT66 165 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 KPNA5O15131 536 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 LILRB5O75023 590 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 SNNO75324 88 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 KIAA0754O94854 1291 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 TEAD1P28347 426 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 CLDN2P57739 230 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 ZXDAP98168 799 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 BCL7AQ4VC05 210 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 ZNF547Q8IVP9 402 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 FAM160A2Q8N612 972 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 SKA2Q8WVK7 121 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 ASB12Q8WXK4 309 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 TRIM55Q9BYV6 548 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 C20orf27Q9GZN8 174 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 THAP1Q9NVV9 213 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 CA5BQ9Y2D0 317 aa20.25■□□□□ 0.83
KPNA1-210ENST00000494339 PCYT1BQ9Y5K3 369 aaPredicted RBP20.25■□□□□ 0.83
KPNA1-210ENST00000494339 SUPT3HB4E1H0 165 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 H2AFYO75367 372 aaKnown RBP20.24■□□□□ 0.83
KPNA1-210ENST00000494339 SUPT3HO75486 399 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 APBB3O95704 486 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 CBSLP0DN79 551 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 MTHFD2P13995 350 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 CBSP35520 551 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 RPS9P46781 194 aaKnown RBP20.24■□□□□ 0.83
KPNA1-210ENST00000494339 NAGLUP54802 743 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 PLA2G4EQ3MJ16 856 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 SYTL3Q4VX76 610 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 PLEKHS1Q5SXH7 462 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 LILRA3Q8N6C8 439 aaPredicted RBP20.24■□□□□ 0.83
KPNA1-210ENST00000494339 ASZ1Q8WWH4 475 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 FOXJ1Q92949 421 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 GATA5Q9BWX5 397 aaPredicted RBP20.24■□□□□ 0.83
KPNA1-210ENST00000494339 GPR174Q9BXC1 333 aa20.24■□□□□ 0.83
KPNA1-210ENST00000494339 UTP6Q9NYH9 597 aaKnown RBP20.24■□□□□ 0.83
KPNA1-210ENST00000494339 POM121BA6NF01 834 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 NCF1BA6NI72 391 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 NCF1CA8MVU1 366 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 ITM2AO43736 263 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 SMIM24O75264 130 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 LYPLA1O75608 230 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 IPO13O94829 963 aaKnown RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 MYCLP1P12525 358 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 NCF1P14598 390 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 CD6P30203 668 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 PRKAA2P54646 552 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 OCRLQ01968 901 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 GBX1Q14549 363 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 CYHR1Q6ZMK1 362 aa20.23■□□□□ 0.83
KPNA1-210ENST00000494339 ZNF514Q96K75 400 aaPredicted RBP20.23■□□□□ 0.83
KPNA1-210ENST00000494339 WSB2Q9NYS7 404 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms