RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ASCL2Q99929 193 aa3.97□□□□□ -1.77
ITGB1-216ENST00000493758 CHCHD6Q9BRQ6 235 aa3.97□□□□□ -1.77
ITGB1-216ENST00000493758 TRPC7Q9HCX4 862 aa3.97□□□□□ -1.77
ITGB1-216ENST00000493758 ADPRHL2Q9NX46 363 aa3.97□□□□□ -1.77
ITGB1-216ENST00000493758 WSB2Q9NYS7 404 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-216ENST00000493758 SEC63Q9UGP8 760 aaKnown RBP3.97□□□□□ -1.77
ITGB1-216ENST00000493758 LAS1LQ9Y4W2 734 aaKnown RBP3.97□□□□□ -1.77
ITGB1-216ENST00000493758 ZNF541Q9H0D2 1346 aa3.96□□□□□ -1.77
ITGB1-216ENST00000493758 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 PLK4O00444 970 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 ZBTB43O43298 467 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 GCNT3O95395 438 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 MSH3P20585 1137 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 HADHAP40939 763 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 PNLIPRP2P54317 469 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 SIM2Q14190 667 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-216ENST00000493758 IRF3Q14653 427 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 DUSP28Q4G0W2 176 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 NDUFAF5Q5TEU4 345 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.78
ITGB1-216ENST00000493758 STPG4Q8N801 248 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 FCAMRQ8WWV6 532 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 STAMBPL1Q96FJ0 436 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 SLC47A1Q96FL8 570 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 DDOQ99489 341 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 LITAFQ99732 161 aa3.96□□□□□ -1.78
ITGB1-216ENST00000493758 DENND2DQ9H6A0 471 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-216ENST00000493758 VILLO15195 856 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 RNF224P0DH78 156 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 LIFP15018 202 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 EIF5P55010 431 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 NAP1L1P55209 391 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 PMP22Q01453 160 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 KCNC3Q14003 757 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 FCN2Q15485 313 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 RAB41Q5JT25 222 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 KRT79Q5XKE5 535 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 RBMS3Q6XE24 437 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 OR2T12Q8NG77 320 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 NSUN4Q96CB9 384 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 FAM120BQ96EK7 910 aaKnown RBP3.95□□□□□ -1.78
ITGB1-216ENST00000493758 TIGD1Q96MW7 591 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 HRH4Q9H3N8 390 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 DNAJC18Q9H819 358 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 TBC1D22BQ9NU19 505 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 RUSC2Q8N2Y8 1516 aa3.95□□□□□ -1.78
ITGB1-216ENST00000493758 PRR32B1ATL7 298 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 ZG16O60844 167 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 CSPG5O95196 566 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 H1F0P07305 194 aaKnown RBP3.94□□□□□ -1.78
ITGB1-216ENST00000493758 CLTBP09497 229 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 PRSS56P0CW18 603 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 MMP9P14780 707 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 EPHA2P29317 976 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 HOXD13P35453 343 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SLC15A1P46059 708 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 GNB1P62873 340 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SIRPAP78324 504 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 HYIQ5T013 277 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 GCNT6Q5T4J0 391 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 DGLUCYQ7Z3D6 616 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 PLD3Q8IV08 490 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 C1orf131Q8NDD1 294 aaKnown RBP3.94□□□□□ -1.78
ITGB1-216ENST00000493758 BARHL1Q9BZE3 327 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 RTN4RQ9BZR6 473 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SEMA6AQ9H2E6 1030 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SLA2Q9H6Q3 261 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 HHATLQ9HCP6 504 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 BLOC1S4Q9NUP1 217 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SLC38A7Q9NVC3 462 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 COQ3Q9NZJ6 369 aa3.94□□□□□ -1.78
ITGB1-216ENST00000493758 SUCLA2Q9P2R7 463 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-216ENST00000493758 WBP11Q9Y2W2 641 aaKnown RBP3.94□□□□□ -1.78
ITGB1-216ENST00000493758 A0A0G2JLW4 131 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 LRRC72A6NJI9 287 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 PTGES3LE9PB15 166 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 SLC22A2O15244 555 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 DOK2O60496 412 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 CLPTM1O96005 669 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 CGAP01215 116 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 NR3C1P04150 777 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 ITGA3P26006 1051 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 ARSEP51690 589 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 THOP1P52888 689 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 ATP12AP54707 1039 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 MFAP4P55083 255 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 PNRC1Q12796 327 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-216ENST00000493758 NR1D2Q14995 579 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 ARHGAP11AQ6P4F7 1023 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 KLC3Q6P597 504 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 INTS8Q75QN2 995 aaKnown RBP3.93□□□□□ -1.78
ITGB1-216ENST00000493758 SZRD1Q7Z422 152 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 SENP5Q96HI0 755 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-216ENST00000493758 PRMT6Q96LA8 375 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-216ENST00000493758 SRSF8Q9BRL6 282 aaKnown RBP3.93□□□□□ -1.78
ITGB1-216ENST00000493758 MAF1Q9H063 256 aa3.93□□□□□ -1.78
ITGB1-216ENST00000493758 SMARCAD1Q9H4L7 1026 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms