RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CAV1Q03135 178 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 CRYMQ14894 314 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 CLCA4Q14CN2 919 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 AMZ1Q400G9 498 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 DNTTIP2Q5QJE6 756 aaKnown RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 CENPUQ71F23 418 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 ANKMY2Q8IV38 441 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 IGDCC3Q8IVU1 814 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 WDR48Q8TAF3 677 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 CALML6Q8TD86 181 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 ELMO1Q92556 727 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 CXorf40BQ96DE9 158 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 SCNM1Q9BWG6 230 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 TSSK1BQ9BXA7 367 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 WWP1Q9H0M0 922 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 LRRN3Q9H3W5 708 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 COG4Q9H9E3 785 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 PPANQ9NQ55 473 aaKnown RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 KCNK4Q9NYG8 393 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 ZNF624Q9P2J8 865 aaPredicted RBP13.7□□□□□ -0.22
CCM2-217ENST00000492883 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 CLCA2Q9UQC9 943 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
CCM2-217ENST00000492883 COL5A1P20908 1838 aaPredicted RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 IQCF5A8MTL0 148 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 B4GAT1O43505 415 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 FMO4P31512 558 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 SLC19A1P41440 591 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 GPR3P46089 330 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 EIF3BP55884 814 aaKnown RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 CTBP1Q13363 440 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 SPIDRQ14159 915 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 BRD3Q15059 726 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 RPE65Q16518 533 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 HSP90AA5PQ58FG0 334 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 ZNF470Q6ECI4 717 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 ZNF438Q7Z4V0 828 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 SPRED1Q7Z699 444 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 KCNMB4Q86W47 210 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 LRRC6Q86X45 466 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 CILP2Q8IUL8 1156 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 LMNTD2Q8IXW0 634 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 LILRA3Q8N6C8 439 aaPredicted RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 GABPB2Q8TAK5 448 aaPredicted RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 ART4Q93070 314 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 AHCYL2Q96HN2 611 aaKnown RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 CARD6Q9BX69 1037 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.69□□□□□ -0.22
CCM2-217ENST00000492883 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 GRHL1Q9NZI5 618 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 GNPTGQ9UJJ9 305 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 KLK13Q9UKR3 277 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 VPS9D1Q9Y2B5 631 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 CRYL1Q9Y2S2 319 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 TEX264Q9Y6I9 313 aa13.69□□□□□ -0.22
CCM2-217ENST00000492883 A0A1W2PQM1 296 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 IFRD1O00458 451 aaPredicted RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 LIN7AO14910 233 aaPredicted RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 ERVK-10P10266 1014 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 RPS3P23396 243 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCM2-217ENST00000492883 UBE2IP63279 158 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCM2-217ENST00000492883 RPA4Q13156 261 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 BOP1Q14137 746 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 KRT33BQ14525 404 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 TRADDQ15628 312 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 SYTL3Q4VX76 610 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 GLE1Q53GS7 698 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 UNC5AQ6ZN44 842 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 RBM44Q6ZP01 1051 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 USP53Q70EK8 1073 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 DENND6AQ8IWF6 608 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 PALM2Q8IXS6 379 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 ZBED8Q8IZ13 594 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 UNC5BQ8IZJ1 945 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 FBXO36Q8NEA4 188 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 PYROXD1Q8WU10 500 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 TMEM159Q96B96 161 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 C12orf66Q96MD2 445 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 PANX3Q96QZ0 392 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 INSM2Q96T92 566 aaPredicted RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 FAM167BQ9BTA0 163 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 SAYSD1Q9NPB0 183 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms