RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 MARK4Q96L34 752 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 HSFY1Q96LI6 401 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 FCRL3Q96P31 734 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF577Q9BSK1 485 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SLC25A23Q9BV35 468 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 GATA5Q9BWX5 397 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 IDI2Q9BXS1 227 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 RHOBTB2Q9BYZ6 727 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PCIF1Q9H4Z3 704 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZNF556Q9HAH1 456 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRIM39Q9HCM9 518 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ABCB10Q9NRK6 738 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 DDX28Q9NUL7 540 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 OXSMQ9NWU1 459 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 B3GNT2Q9NY97 397 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 MTMR4Q9NYA4 1195 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 IL37Q9NZH6 218 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 ACTR3BQ9P1U1 418 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SAE1Q9UBE0 346 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PCSK1NQ9UHG2 260 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SFMBT1Q9UHJ3 866 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 SNX7Q9UNH6 387 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 USP22Q9UPT9 525 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 AGTPBP1Q9UPW5 1226 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 PCM1Q15154 2024 aa4.71□□□□□ -1.66
CDC42BPA-213ENST00000488131 KAT6AQ92794 2004 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 IGLV3-22A0A075B6J6 115 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MAGEB16A2A368 324 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 METTL15A6NJ78 407 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRPC5OSA6NMA1 111 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 BBIP1A8MTZ0 92 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 LEUTXA8MZ59 168 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TISP43B9A030 160 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SDHDO14521 159 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MRASO14807 208 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 B4GAT1O43505 415 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 EXTL3O43909 919 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 LRCH4O75427 683 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PSMD10O75832 226 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SUPT7LO94864 414 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ENDOD1O94919 500 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SEMA3DO95025 777 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZBTB7AO95365 584 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CAPN1P07384 714 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ASNSP08243 561 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SNRPB2P08579 225 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 KRT19P08727 400 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 UMPSP11172 480 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ACADMP11310 421 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MLNP12872 115 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 IL7P13232 177 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ICAM2P13598 275 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 GFAPP14136 432 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 IFNGR1P15260 489 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ITGA2P17301 1181 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 HOXC12P31275 282 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CDH5P33151 784 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CSTF2P33240 577 aaKnown RBP eCLIP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 EPHX2P34913 555 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ECI1P42126 302 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 POLD2P49005 469 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CSRP3P50461 194 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ALDH3A2P51648 485 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CACNB3P54284 484 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ACTR2P61160 394 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SUMO1P63165 101 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 DYNLT1P63172 113 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 EPS8Q12929 822 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 BAMBIQ13145 260 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PARP15Q460N3 678 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CYP27C1Q4G0S4 372 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TRIM61Q5EBN2 209 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 C6orf141Q5SZD1 244 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FAM182AQ5T1J6 154 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZFYVE27Q5T4F4 411 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 SYT6Q5T7P8 510 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TMEM198Q66K66 360 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 LRRC8EQ6NSJ5 796 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 ZYG11AQ6WRX3 759 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 STRADAQ7RTN6 431 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 NIPA1Q7RTP0 329 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FGD2Q7Z6J4 655 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 NOXA1Q86UR1 476 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 P2RY8Q86VZ1 359 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 LDHDQ86WU2 507 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PTRH1Q86Y79 214 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PLCZ1Q86YW0 608 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 CBWD2Q8IUF1 395 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 MAPKAPK5Q8IW41 473 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TBC1D21Q8IYX1 336 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TCTE3Q8IZS6 198 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 C8orf59Q8N0T1 100 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 TCAIMQ8N3R3 496 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 FLCNQ8NFG4 579 aa4.7□□□□□ -1.66
CDC42BPA-213ENST00000488131 PJA1Q8NG27 643 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms