RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DUSP19Q8WTR2 217 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PTPMT1Q8WUK0 201 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ABTB1Q969K4 478 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PTERQ96BW5 349 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMCO6Q96DC7 493 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 DGAT2Q96PD7 388 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 NEK1Q96PY6 1258 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 CDRT15Q96T59 188 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 TUBA1CQ9BQE3 449 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 LRRC1Q9BTT6 524 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 C1QTNF4Q9BXJ3 329 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 RETREG1Q9H6L5 497 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 HHATLQ9HCP6 504 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 KCNS2Q9ULS6 477 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 LOC102723996A0A087X1L8 192 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TCRBV21S2A2A0A5A6 115 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 MED19A0JLT2 244 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 CLEC18AA5D8T8 446 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM178BH3BS89 294 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 J3QR06 171 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 EIF3DO15371 548 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PLPP2O43688 288 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 H1F0P07305 194 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 SNRNP70P08621 437 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 MYBL1P10243 752 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRIM21P19474 475 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 NMBRP28336 390 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 CD81P60033 236 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 ERVFC1-1P60608 527 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 RPS18P62269 152 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PITX1P78337 314 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 RELQ04864 619 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC20A2Q08357 652 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 AIMP1Q12904 312 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 DLG2Q15700 870 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TCP11X2Q5H9J9 407 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 C9orf57Q5W0N0 161 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF534Q76KX8 674 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 LDB1Q86U70 411 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 LONP2Q86WA8 852 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM173Q86WV6 379 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 NAGSQ8N159 534 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 SCML4Q8N228 414 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 NME8Q8N427 588 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 MAB21L3Q8N8X9 362 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 CLEC18CQ8NCF0 446 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 OR5R1Q8NH85 324 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 EXD1Q8NHP7 514 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 HMGCLL1Q8TB92 370 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TBC1D16Q8TBP0 767 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC44A1Q8WWI5 657 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 RHBDF1Q96CC6 855 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 OXNAD1Q96HP4 312 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 MS4A10Q96PG2 267 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 SEPHS2Q99611 448 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 EPYCQ99645 322 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 BAG1Q99933 345 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 AP1M1Q9BXS5 423 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PANK2Q9BZ23 570 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 IL25Q9H293 177 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF556Q9HAH1 456 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 EBF2Q9HAK2 575 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PIH1D3Q9NQM4 214 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM30AQ9NV96 361 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 DPP3Q9NY33 737 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PADI3Q9ULW8 664 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 B3GALT5Q9Y2C3 310 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 DLGAP4Q9Y2H0 992 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRPV2Q9Y5S1 764 aa3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 PDS5AQ29RF7 1337 aaKnown RBP3.62□□□□□ -1.83
HMGB1P36-201ENST00000487709 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZCWPW2A0A1B0GU75 182 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1W2PR77 199 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1W2PS18 150 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRBC2A0A5B9 178 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ASPDHA6ND91 283 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 GPR137BO60478 399 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 DKC1O60832 514 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZWINTO95229 277 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 PGM3O95394 542 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CAVIN2O95810 425 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 DNTTP04053 509 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ATP1A1P05023 1023 aaKnown RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 APOA4P06727 396 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 TUBBP07437 444 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CDH1P12830 882 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 MYOD1P15172 320 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CSF2RAP15509 400 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 AMD1P17707 334 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 IL11P20809 199 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 MCCP23508 829 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 DGKAP23743 735 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 EEF1B2P24534 225 aaKnown RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 PSMC4P43686 418 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 FMO5P49326 533 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SUOXP51687 545 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CSE1LP55060 971 aaKnown RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CDK3Q00526 305 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms