RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PSMD3O43242 534 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 LDB2O43679 373 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 METTL18O95568 372 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 RALBP11234 206 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 ITGALP20701 1170 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 PBLDP30039 288 aaPredicted RBP18.69■□□□□ 0.58
CLIP2-206ENST00000487091 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
CLIP2-206ENST00000487091 P3H1Q32P28 736 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 GPR33Q49SQ1 333 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 DET1Q7L5Y6 550 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 SNX20Q7Z614 316 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 ZNF605Q86T29 641 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 NLGN4XQ8N0W4 816 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 NLGN4YQ8NFZ3 816 aaPredicted RBP18.69■□□□□ 0.58
CLIP2-206ENST00000487091 ZFPM2Q8WW38 1151 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 RSC1A1Q92681 617 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 DCUN1D1Q96GG9 259 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 SLC12A9Q9BXP2 914 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 TRIT1Q9H3H1 467 aaKnown RBP18.69■□□□□ 0.58
CLIP2-206ENST00000487091 LRRC40Q9H9A6 602 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 CRLS1Q9UJA2 301 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 R3HDM2Q9Y2K5 976 aaKnown RBP18.69■□□□□ 0.58
CLIP2-206ENST00000487091 CAPN6Q9Y6Q1 641 aa18.69■□□□□ 0.58
CLIP2-206ENST00000487091 GOLGA6L6A8MZA4 724 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 H7C0S8 307 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 SGTAO43765 313 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 MTHFD1P11586 935 aaKnown RBP18.68■□□□□ 0.58
CLIP2-206ENST00000487091 LIFP15018 202 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 KLHL35Q6PF15 583 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 NXPE1Q8N323 547 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 EXD3Q8N9H8 876 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 GPR150Q8NGU9 434 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 KLHL6Q8WZ60 621 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 COPS8Q99627 209 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 TMEM121Q9BTD3 319 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 TSGA10Q9BZW7 698 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 SEMA5BQ9P283 1151 aa18.68■□□□□ 0.58
CLIP2-206ENST00000487091 HELZ2Q9BYK8 2649 aaKnown RBP18.68■□□□□ 0.58
CLIP2-206ENST00000487091 ZNF462Q96JM2 2506 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 TCRBV7S2A1N4TA0A589 114 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 CFAP99D6REC4 459 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 RASSF9O75901 435 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 STK17BO94768 372 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 DLGAP3O95886 979 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 ATP1B2P14415 290 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-206ENST00000487091 STIP1P31948 543 aaKnown RBP18.67■□□□□ 0.58
CLIP2-206ENST00000487091 SEPHS1P49903 392 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 GDF10P55107 478 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 TMPRSS15P98073 1019 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 ABHD18Q0P651 414 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 MAP7Q14244 749 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 IL11RAQ14626 422 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 CACHD1Q5VU97 1274 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 EXTL1Q92935 676 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 INSM2Q96T92 566 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-206ENST00000487091 ARHGAP9Q9BRR9 750 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 EFHD1Q9BUP0 239 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 FRMD8P1Q9BZ68 369 aaPredicted RBP18.67■□□□□ 0.58
CLIP2-206ENST00000487091 WWP1Q9H0M0 922 aa18.67■□□□□ 0.58
CLIP2-206ENST00000487091 GCN1Q92616 2671 aaKnown RBP18.67■□□□□ 0.58
CLIP2-206ENST00000487091 C17orf113A0A1B0GUU1 675 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 KIF1CO43896 1103 aaKnown RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 AP2A1O95782 977 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 SFTPCP11686 197 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 PRLHRP49683 370 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 GSDMDP57764 484 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 CYP4F2P78329 520 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 FOXM1Q08050 763 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 TBR1Q16650 682 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 IRGCQ6NXR0 463 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 CYB5D1Q6P9G0 228 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 FAM92BQ6ZTR7 304 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 TIPARPQ7Z3E1 657 aaKnown RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 STYXQ8WUJ0 223 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 UBXN4Q92575 508 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 KIAA1143Q96AT1 154 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 SLC45A3Q96JT2 553 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 DNAJC1Q96KC8 554 aaKnown RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 C12orf66Q96MD2 445 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 CCM2Q9BSQ5 444 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 IMP3Q9NV31 184 aaKnown RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 NLE1Q9NVX2 485 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-206ENST00000487091 ZDHHC3Q9NYG2 299 aa18.66■□□□□ 0.58
CLIP2-206ENST00000487091 IGLV3-16A0A075B6K0 115 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 TRBV5-4A0A0C4DH59 114 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 ZNF891A8MT65 544 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-206ENST00000487091 B8ZZF3 427 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 KRT86O43790 486 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 SLC35G4P0C7Q5 338 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 PLA2G2AP14555 144 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 TPH1P17752 444 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 NELFEP18615 380 aaKnown RBP18.65■□□□□ 0.58
CLIP2-206ENST00000487091 PSMA3P25788 255 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 MC4RP32245 332 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 SH3BP2P78314 561 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 CAPRIN2Q6IMN6 1127 aaKnown RBP18.65■□□□□ 0.58
CLIP2-206ENST00000487091 LINC00523Q86TU6 105 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 CFAP206Q8IYR0 622 aa18.65■□□□□ 0.58
CLIP2-206ENST00000487091 ESX1Q8N693 406 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms