RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TMEM19Q96HH6 336 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF385AQ96PM9 386 aaKnown RBP3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 NEK1Q96PY6 1258 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 SLC22A12Q96S37 553 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 IL25Q9H293 177 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 ERVMER34-1Q9H9K5 563 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 TMEM30AQ9NV96 361 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 ZHX1Q9UKY1 873 aaPredicted RBP3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 ASTN2O75129 1339 aaPredicted RBP3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 PDS5AQ29RF7 1337 aaKnown RBP3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF541Q9H0D2 1346 aa3.43□□□□□ -1.86
SNRNP27-204ENST00000487029 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 LILRA5A6NI73 299 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 SRRM3A6NNA2 597 aaPredicted RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 PLK4O00444 970 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 IPO8O15397 1037 aaKnown RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 GGPS1O95749 300 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 DAOP14920 347 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CPT2P23786 658 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 GNL1P36915 607 aaPredicted RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 USP8P40818 1118 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 RAD23AP54725 363 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CD81P60033 236 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 COG7P83436 770 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF234Q14588 700 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 MELKQ14680 651 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 TMEM35AQ53FP2 167 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 RAB6CQ53S08 254 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 C1orf141Q5JVX7 400 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 ALS2CLQ60I27 953 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 FAM109BQ6ICB4 259 aaPredicted RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 TMEM211Q6ICI0 200 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF704Q6ZNC4 412 aaPredicted RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CREB3L2Q70SY1 520 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 Q75L30 129 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CAMKMTQ7Z624 323 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 FBXO39Q8N4B4 442 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 C1orf52Q8N6N3 182 aaKnown RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CFAP61Q8NHU2 1237 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 SLC20A1Q8WUM9 679 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 RMDN1Q96DB5 314 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 ADGRG7Q96K78 797 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 MOV10L1Q9BXT6 1211 aaKnown RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 RAB6CQ9H0N0 254 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 C5AR2Q9P296 337 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 WDR35Q9P2L0 1181 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 DDX25Q9UHL0 483 aaKnown RBP3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 OSGIN1Q9UJX0 560 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 VDAC3Q9Y277 283 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 CCL27Q9Y4X3 112 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 PCDHAC2Q9Y5I4 1007 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 PRAG1Q86YV5 1406 aa3.42□□□□□ -1.86
SNRNP27-204ENST00000487029 A0A0G2JPF8 293 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 OR2M5A3KFT3 312 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 OR5K3A6NET4 321 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TSPY2A6NKD2 308 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 HNRNPCL3B7ZW38 293 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 BUD23O43709 281 aaKnown RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SSX4O60224 188 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TRUB2O95900 331 aaKnown RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TSPY3P0CV98 308 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TSPY8P0CW00 308 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 HNRNPCL4P0DMR1 293 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 MYOD1P15172 320 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 POLR2CP19387 275 aaPredicted RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 PDLIM4P50479 330 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 CSE1LP55060 971 aaKnown RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 CDH13P55290 713 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 ERVFC1-1P60608 527 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 PLIN5Q00G26 463 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TSPY1Q01534 308 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SLC20A2Q08357 652 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 KIF5AQ12840 1032 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SNTA1Q13424 505 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SF3B4Q15427 424 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 LETM2Q2VYF4 491 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SPECC1Q5M775 1068 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TEX38Q6PEX7 206 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 GFRALQ6UXV0 394 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 CHST3Q7LGC8 479 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 KRT77Q7Z794 578 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 ODF3L1Q8IXM7 274 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 KCNH5Q8NCM2 988 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 OR6J1Q8NGC5 347 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 OR52I2Q8NH67 350 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 WDR20Q8TBZ3 569 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 TEKT4Q8WW24 435 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 FIG4Q92562 907 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 VPS33AQ96AX1 596 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 RTP4Q96DX8 246 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 ERLEC1Q96DZ1 483 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 SPACA9Q96E40 222 aaPredicted RBP3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 CDCA5Q96FF9 252 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 BICD1Q96G01 975 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 CFAP57Q96MR6 1250 aa3.41□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF830Q96NB3 372 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms