RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TYSND1Q2T9J0 566 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 SYTL3Q4VX76 610 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 HES3Q5TGS1 186 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 PTRHD1Q6GMV3 140 aaKnown RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 IYDQ6PHW0 289 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 UNC5AQ6ZN44 842 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 CAPN12Q6ZSI9 719 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 RAB44Q7Z6P3 723 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 SLC9B2Q86UD5 537 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 C17orf82Q86X59 251 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 DENND6AQ8IWF6 608 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 CFAP206Q8IYR0 622 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 ZBED8Q8IZ13 594 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 LILRA3Q8N6C8 439 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 FBXO36Q8NEA4 188 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 FBXO25Q8TCJ0 367 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 ELMO1Q92556 727 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 ART4Q93070 314 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 LRRC39Q96DD0 335 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 WDR83Q9BRX9 315 aaKnown RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 FAM167BQ9BTA0 163 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 WWP1Q9H0M0 922 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 COG4Q9H9E3 785 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 SAYSD1Q9NPB0 183 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 WDR37Q9Y2I8 494 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 TEX264Q9Y6I9 313 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 FAM169AQ9Y6X4 670 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 CACNA1AO00555 2505 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 PTPRBP23467 1997 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 KLHL33A6NCF5 533 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 ESPNB1AK53 854 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 E7ESA3 106 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 F8W8V4 182 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CASC3O15234 703 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 PPM1DO15297 605 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 VIPP01282 170 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 RPLP0P05388 317 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 SLC35G4P0C7Q5 338 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 ERVK-10P10266 1014 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CDK4P11802 303 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 BRAFP15056 766 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 ALDH4A1P30038 563 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 SLC1A2P43004 574 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 PREPP48147 710 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CSE1LP55060 971 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 CTBP1Q13363 440 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 AMZ1Q400G9 498 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 HSP90AA5PQ58FG0 334 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 RNF187Q5TA31 235 aaPredicted RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 AGAP9Q5VTM2 703 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 METRNLQ641Q3 311 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 ZDHHC24Q6UX98 284 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 NAPRTQ6XQN6 538 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 SPRED1Q7Z699 444 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CILP2Q8IUL8 1156 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CCNJLQ8IV13 435 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 KRT222Q8N1A0 295 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 GPR150Q8NGU9 434 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 LKAAEAR1Q8TD35 194 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CALML6Q8TD86 181 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 LPGAT1Q92604 370 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CERS2Q96G23 380 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 RMDN2Q96LZ7 410 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 TSSK1BQ9BXA7 367 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 ZMYND15Q9H091 742 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 EPB41L5Q9HCM4 733 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 PPANQ9NQ55 473 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 FBXO6Q9NRD1 293 aaPredicted RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 IMP3Q9NV31 184 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 ZNF624Q9P2J8 865 aaPredicted RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 GNPTGQ9UJJ9 305 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 KLK13Q9UKR3 277 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CRYL1Q9Y2S2 319 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
HPS4-214ENST00000485842 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
HPS4-214ENST00000485842 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 C17orf113A0A1B0GUU1 675 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 FAM149AA5PLN7 773 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 IQCF5A8MTL0 148 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 RPS3P23396 243 aaKnown RBP eCLIP11.6□□□□□ -0.55
HPS4-214ENST00000485842 FMO4P31512 558 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 SLC19A1P41440 591 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 MAPK9P45984 424 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 FASLGP48023 281 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 OR1D5P58170 312 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 UBE2IP63279 158 aaKnown RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 CCL7P80098 99 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 MPP1Q00013 466 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 INSM1Q01101 510 aaPredicted RBP11.6□□□□□ -0.55
HPS4-214ENST00000485842 SPIDRQ14159 915 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 CLCA4Q14CN2 919 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 ZNF789Q5FWF6 425 aa11.6□□□□□ -0.55
HPS4-214ENST00000485842 CTSL3PQ5NE16 218 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms