RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CYP4X1Q8N118 509 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 SIDT2Q8NBJ9 832 aaKnown RBP17.27■□□□□ 0.36
CHMP3-207ENST00000485465 HM13Q8TCT9 377 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 INPP5DQ92835 1189 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 ZBTB9Q96C00 473 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 TSPAN17Q96FV3 270 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 RUFY1Q96T51 708 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 SLC30A3Q99726 388 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 TMEM168Q9H0V1 697 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 CAAP1Q9H8G2 361 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 FSCN3Q9NQT6 498 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 GULP1Q9UBP9 304 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 APOBEC3BQ9UH17 382 aaKnown RBP17.27■□□□□ 0.36
CHMP3-207ENST00000485465 TRMT6Q9UJA5 497 aaKnown RBP17.27■□□□□ 0.36
CHMP3-207ENST00000485465 SASH3O75995 380 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CTSEP14091 401 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 STMN1P16949 149 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 VCLP18206 1134 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 SERPINB8P50452 374 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 PGGT1BP53609 377 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 RAB10P61026 200 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CTBSQ01459 385 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 DMPKQ09013 629 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ZKSCAN8Q15776 578 aaPredicted RBP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CCDC6Q16204 474 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ZNF423Q2M1K9 1284 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 NAPRTQ6XQN6 538 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 FAM83HQ6ZRV2 1179 aaPredicted RBP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CMC1Q7Z7K0 106 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CFAP206Q8IYR0 622 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ZBTB2Q8N680 514 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 CD200R1Q8TD46 325 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ISL2Q96A47 359 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ELF4Q99607 663 aaPredicted RBP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 NUSAP1Q9BXS6 441 aaKnown RBP17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ZDHHC5Q9C0B5 715 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 POPDC3Q9HBV1 291 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 GMEB2Q9UKD1 530 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 ST14Q9Y5Y6 855 aa17.26■□□□□ 0.35
CHMP3-207ENST00000485465 SLC5A10A0PJK1 596 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 PRR19A6NJB7 356 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 H3BM21 787 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 AGPSO00116 658 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 ARHGAP33O14559 1287 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 TPP1O14773 563 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 LIN7AO14910 233 aaPredicted RBP17.25■□□□□ 0.35
CHMP3-207ENST00000485465 KHNYNO15037 678 aaKnown RBP17.25■□□□□ 0.35
CHMP3-207ENST00000485465 GPC4O75487 556 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
CHMP3-207ENST00000485465 APOA4P06727 396 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SYPP08247 313 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 KRT15P19012 456 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 CRABP2P29373 138 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 TYK2P29597 1187 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 MAGEA12P43365 314 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 RXRGP48443 463 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 CLCNKAP51800 687 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 BOP1Q14137 746 aaKnown RBP17.25■□□□□ 0.35
CHMP3-207ENST00000485465 NFE2L1Q14494 772 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 ZNF460Q14592 562 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 HLA-BQ31612 363 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SYTL3Q4VX76 610 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 PLEKHS1Q5SXH7 462 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 PAQR3Q6TCH7 311 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 IL27RAQ6UWB1 636 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 XKR5Q6UX68 686 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 NRROSQ86YC3 692 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SPNS2Q8IVW8 549 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 CCL4L1Q8NHW4 92 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 GPBAR1Q8TDU6 330 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 ASZ1Q8WWH4 475 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 LRRC61Q9BV99 259 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SMOC1Q9H4F8 434 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SNX15Q9NRS6 342 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 SPASTQ9UBP0 616 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 FAM8A1Q9UBU6 413 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 KCNK6Q9Y257 313 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 DNAJC16Q9Y2G8 782 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 GON4LQ3T8J9 2241 aa17.25■□□□□ 0.35
CHMP3-207ENST00000485465 LRP4O75096 1905 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 RGS16O15492 202 aaPredicted RBP17.24■□□□□ 0.35
CHMP3-207ENST00000485465 PHGDHO43175 533 aaKnown RBP17.24■□□□□ 0.35
CHMP3-207ENST00000485465 DFNA5O60443 496 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 RFPL1O75677 317 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 WISP3O95389 354 aaPredicted RBP17.24■□□□□ 0.35
CHMP3-207ENST00000485465 LMNAP02545 664 aaKnown RBP17.24■□□□□ 0.35
CHMP3-207ENST00000485465 MT-ND3P03897 115 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 AK4P27144 223 aaPredicted RBP17.24■□□□□ 0.35
CHMP3-207ENST00000485465 CSRP3P50461 194 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 IRX4P78413 519 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 HSPA14Q0VDF9 509 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 ILF3Q12906 894 aaKnown RBP eCLIP17.24■□□□□ 0.355e-7■■■■□ 23.6
CHMP3-207ENST00000485465 C1orf61Q13536 156 aa17.24■□□□□ 0.35
CHMP3-207ENST00000485465 GBX1Q14549 363 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms