RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 WASH6PQ9NQA3 447 aa11.41□□□□□ -0.58
VARS2-208ENST00000477052 FKBPLQ9UIM3 349 aa11.41□□□□□ -0.58
VARS2-208ENST00000477052 TUBD1Q9UJT1 453 aa11.41□□□□□ -0.58
VARS2-208ENST00000477052 MAST4O15021 2626 aa11.41□□□□□ -0.58
VARS2-208ENST00000477052 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
VARS2-208ENST00000477052 MACROD2A1Z1Q3 448 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 OR6C74A6NCV1 312 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.58
VARS2-208ENST00000477052 PSTPIP1O43586 416 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 ZRANB2O95218 330 aaKnown RBP eCLIP11.4□□□□□ -0.58
VARS2-208ENST00000477052 PDGFAP04085 211 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 MSH3P20585 1137 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 CASRP41180 1078 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 TNNT3P45378 269 aaPredicted RBP11.4□□□□□ -0.58
VARS2-208ENST00000477052 MC1RQ01726 317 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 XRCC4Q13426 336 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 DNASE1L3Q13609 305 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 MAP7Q14244 749 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 SPARCL1Q14515 664 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 TCEAL1Q15170 157 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 LACTB2Q53H82 288 aaPredicted RBP11.4□□□□□ -0.58
VARS2-208ENST00000477052 LDLRAP1Q5SW96 308 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 BZW1Q7L1Q6 419 aaKnown RBP11.4□□□□□ -0.58
VARS2-208ENST00000477052 PPP1R3BQ86XI6 285 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 OR4K2Q8NGD2 314 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 ZNF398Q8TD17 642 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 BRSK1Q8TDC3 778 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 SLC41A2Q96JW4 573 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 C12orf66Q96MD2 445 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 FSD1LQ9BXM9 530 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 TRABDQ9H4I3 376 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 EPHA6Q9UF33 1036 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 PADI1Q9ULC6 663 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 INTUQ9ULD6 942 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 PCDHB3Q9Y5E6 796 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 DOPEY2Q9Y3R5 2298 aa11.4□□□□□ -0.58
VARS2-208ENST00000477052 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 TOX3O15405 576 aaPredicted RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 MTSS1O43312 755 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 SGTAO43765 313 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 CREG1O75629 220 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 LCA5LO95447 670 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 PRAMEF1O95521 474 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 EPOP01588 193 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 PRSS56P0CW18 603 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 HLA-DPA1P20036 260 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 PSMB4P28070 264 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 ARL4DP49703 201 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 MLLT10P55197 1068 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 FOXK1P85037 733 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 DMPKQ09013 629 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 MPP3Q13368 585 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 SEPT6Q14141 434 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
VARS2-208ENST00000477052 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 METRNLQ641Q3 311 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 CPZQ66K79 652 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 LCN10Q6JVE6 187 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 BBS12Q6ZW61 710 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 CNGA4Q8IV77 575 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 RBM12BQ8IXT5 1001 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 TC2NQ8N9U0 490 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 OR13C4Q8NGS5 318 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 SRPK1Q96SB4 655 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 ZCCHC2Q9C0B9 1178 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 GBA3Q9H227 469 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 ACTL8Q9H568 366 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 ASB8Q9H765 288 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 PDE7BQ9NP56 450 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 LHX9Q9NQ69 397 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 FGF21Q9NSA1 209 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 HRASLS2Q9NWW9 162 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 HACD3Q9P035 362 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 TLK1Q9UKI8 766 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 RARRES3Q9UL19 164 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 PCDHA13Q9Y5I0 950 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 DUSP10Q9Y6W6 482 aa11.39□□□□□ -0.59
VARS2-208ENST00000477052 TNRC6AQ8NDV7 1962 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 SPENQ96T58 3664 aaKnown RBP11.39□□□□□ -0.59
VARS2-208ENST00000477052 NAV2Q8IVL1 2488 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 OR5K3A6NET4 321 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 POLR2CP19387 275 aaPredicted RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 CDKN1CP49918 316 aaPredicted RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 KPNA2P52292 529 aaKnown RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 XIAPP98170 497 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 OTUD4Q01804 1114 aaKnown RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 SRSF1Q07955 248 aaKnown RBP eCLIP11.38□□□□□ -0.59
VARS2-208ENST00000477052 IL10RAQ13651 578 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 ITGA9Q13797 1035 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 GSE1Q14687 1217 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms