RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 FAM47EQ6ZV65 393 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 OTOAQ7RTW8 1153 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 PIWIL4Q7Z3Z4 852 aaKnown RBP10.57□□□□□ -0.72
SP140-208ENST00000473711 CPLX4Q7Z7G2 160 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 HEATR4Q86WZ0 1026 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 PJA1Q8NG27 643 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 OR2T34Q8NGX1 318 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 ELMO1Q92556 727 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 EXT2Q93063 718 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 KIAA1191Q96A73 305 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 FUBP1Q96AE4 644 aaKnown RBP10.57□□□□□ -0.72
SP140-208ENST00000473711 CLDN23Q96B33 292 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 PDLIM5Q96HC4 596 aaKnown RBP10.57□□□□□ -0.72
SP140-208ENST00000473711 COX14Q96I36 57 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 MYOCQ99972 504 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 CCM2Q9BSQ5 444 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 TSSK1BQ9BXA7 367 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 LGR4Q9BXB1 951 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 C1QTNF7Q9BXJ2 289 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 SLCO1B3Q9NPD5 702 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 FGFR1OP2Q9NVK5 253 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 OXSMQ9NWU1 459 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 USP36Q9P275 1121 aaKnown RBP10.57□□□□□ -0.72
SP140-208ENST00000473711 KLHL42Q9P2K6 505 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 FAM8A1Q9UBU6 413 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
SP140-208ENST00000473711 NEMP2A6NFY4 417 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 QSOX1O00391 747 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 BTN3A1O00481 513 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 VEGFDO43915 354 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TRIM13O60858 407 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 SMIM24O75264 130 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 SEMA4FO95754 770 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 DCNP07585 359 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 ZNF8P17098 575 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 ATP5F1P24539 256 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 PBLDP30039 288 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 OXTRP30559 389 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 IGFALSP35858 605 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 PXNP49023 591 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 PRLHRP49683 370 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 ZXDAP98168 799 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 HSPA14Q0VDF9 509 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 BST1Q10588 318 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 BOP1Q14137 746 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 TSNQ15631 228 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TRIM69Q86WT6 500 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 MYO1HQ8N1T3 1032 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 SPEM1Q8N4L4 309 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 FRMD1Q8N878 549 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 STAG3L4Q8TBR4 150 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 BCAS4Q8TDM0 211 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 SREK1Q8WXA9 508 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 RLN3Q8WXF3 142 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 ASB12Q8WXK4 309 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 MOCOSQ96EN8 888 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TOE1Q96GM8 510 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 NECAB3Q96P71 396 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 TMUB1Q9BVT8 246 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TEX101Q9BY14 249 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 PITPNM3Q9BZ71 974 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TPSD1Q9BZJ3 242 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 ZCCHC2Q9C0B9 1178 aaKnown RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
SP140-208ENST00000473711 CYP4F12Q9HCS2 524 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 ACSS2Q9NR19 701 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 RNF112Q9ULX5 631 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 OR1A2Q9Y585 309 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
SP140-208ENST00000473711 TMEM202A6NGA9 273 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 SUPT3HB4E1H0 165 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 UBXN8O00124 270 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 KLF11O14901 512 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 KPNA5O15131 536 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 ITM2AO43736 263 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 SUPT3HO75486 399 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 POP7O75817 140 aaKnown RBP10.55□□□□□ -0.72
SP140-208ENST00000473711 FSBPO95073 299 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 APBB3O95704 486 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 IGLV3-19P01714 112 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 SERPINE1P05121 402 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 CBSLP0DN79 551 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 TEAD1P28347 426 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 CD6P30203 668 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 CBSP35520 551 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 TRIM23P36406 574 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 CLDN2P57739 230 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 MTAPQ13126 283 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 BCL7AQ4VC05 210 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 PLEKHS1Q5SXH7 462 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 LIPMQ5VYY2 423 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 CRTC3Q6UUV7 619 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 TRAPPC5Q8IUR0 188 aa10.55□□□□□ -0.72
SP140-208ENST00000473711 VRK3Q8IV63 474 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms