RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
TRIM56-203ENST00000467847 TLK1Q9UKI8 766 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 PKP3Q9Y446 797 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 SPTAN1Q13813 2472 aaKnown RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 RECKO95980 971 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 EBLN1P0CF75 366 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 MTHFD1P11586 935 aaKnown RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 CA5AP35218 305 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 ACY1Q03154 408 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 XRCC4Q13426 336 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 TAZQ16635 292 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 DNTTIP2Q5QJE6 756 aaKnown RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 GPRC6AQ5T6X5 926 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 SPOCD1Q6ZMY3 1216 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 PID1Q7Z2X4 250 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 BPHLQ86WA6 291 aaPredicted RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 KMT5CQ86Y97 462 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 ZNF567Q8N184 647 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 OXNAD1Q96HP4 312 aaPredicted RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 FCRL4Q96PJ5 515 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 FCRL5Q96RD9 977 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 MAP3K3Q99759 626 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 FGF21Q9NSA1 209 aa16.88■□□□□ 0.29
TRIM56-203ENST00000467847 CFAP20Q9Y6A4 193 aaKnown RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 DNMT3AQ9Y6K1 912 aaPredicted RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 UTP20O75691 2785 aaKnown RBP16.88■□□□□ 0.29
TRIM56-203ENST00000467847 UBA6A0AVT1 1052 aaPredicted RBP16.87■□□□□ 0.29
TRIM56-203ENST00000467847 TLCD2A6NGC4 264 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
TRIM56-203ENST00000467847 PSTPIP1O43586 416 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 MFAP3LO75121 409 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 HLA-DPA1P20036 260 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 MSH3P20585 1137 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 AKT1P31749 480 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 ADCY2Q08462 1091 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 MPP3Q13368 585 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 FNBP1LQ5T0N5 605 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 METRNLQ641Q3 311 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 CERS6Q6ZMG9 384 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 DET1Q7L5Y6 550 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 ATCAYQ86WG3 371 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 MIB2Q96AX9 1013 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 HAUS1Q96CS2 278 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 ZNF514Q96K75 400 aaPredicted RBP16.87■□□□□ 0.29
TRIM56-203ENST00000467847 CD180Q99467 661 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 VAT1Q99536 393 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 FSD1LQ9BXM9 530 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 SMOXQ9NWM0 555 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 HRASLS2Q9NWW9 162 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 RSPH14Q9UHP6 348 aa16.87■□□□□ 0.29
TRIM56-203ENST00000467847 TNRC6AQ8NDV7 1962 aaKnown RBP16.87■□□□□ 0.29
TRIM56-203ENST00000467847 NOTCH2Q04721 2471 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 BLACEA4D250 179 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 CLEC18AA5D8T8 446 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 OR5K3A6NET4 321 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 DNAJB5O75953 348 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 MLLT10P55197 1068 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 HSD11B2P80365 405 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 PDE1BQ01064 536 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 TCEAL1Q15170 157 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 TFDP3Q5H9I0 405 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 FAM199XQ6PEV8 388 aaPredicted RBP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 CLEC18BQ6UXF7 455 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 OOSP2Q86WS3 158 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 VSTM4Q8IW00 320 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 APLFQ8IW19 511 aaPredicted RBP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 BEND7Q8N7W2 519 aaPredicted RBP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 CLEC18CQ8NCF0 446 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 SEC14L1Q92503 715 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 QKIQ96PU8 341 aaKnown RBP eCLIP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 RUFY1Q96T51 708 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 GPR87Q9BY21 358 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 WWP1Q9H0M0 922 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 AKIRIN1Q9H9L7 192 aaPredicted RBP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 FAM8A1Q9UBU6 413 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 INTUQ9ULD6 942 aa16.86■□□□□ 0.29
TRIM56-203ENST00000467847 SPTBN1Q01082 2364 aaKnown RBP16.86■□□□□ 0.29
TRIM56-203ENST00000467847 STX7O15400 261 aaKnown RBP16.85■□□□□ 0.29
TRIM56-203ENST00000467847 PRAMEF1O95521 474 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 PTPN4P29074 926 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 RPS18P62269 152 aaKnown RBP16.85■□□□□ 0.29
TRIM56-203ENST00000467847 RPS15P62841 145 aaKnown RBP16.85■□□□□ 0.29
TRIM56-203ENST00000467847 TUBB4BP68371 445 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 SEMA5AQ13591 1074 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 TUBB2AQ13885 445 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 PTPRCAPQ14761 206 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 UGT8Q16880 541 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 ARMC6Q6NXE6 501 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 DUS1LQ6P1R4 473 aaKnown RBP16.85■□□□□ 0.29
TRIM56-203ENST00000467847 TMEM126BQ8IUX1 230 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 CCDC50Q8IVM0 306 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 D2HGDHQ8N465 521 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 ZNF398Q8TD17 642 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 C12orf66Q96MD2 445 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 PSMG3-AS1Q96PY0 264 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 INSM2Q96T92 566 aaPredicted RBP16.85■□□□□ 0.29
TRIM56-203ENST00000467847 TUBB2BQ9BVA1 445 aa16.85■□□□□ 0.29
TRIM56-203ENST00000467847 TRIM55Q9BYV6 548 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms