RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 AVL9Q8NBF6 648 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
MSH5-212ENST00000467319 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 ART4Q93070 314 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 TCF12Q99081 682 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 TTC1Q99614 292 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 COG4Q9H9E3 785 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 VPS37BQ9H9H4 285 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 L2HGDHQ9H9P8 463 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 IL1RAPL1Q9NZN1 696 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 ZNF624Q9P2J8 865 aaPredicted RBP10.84□□□□□ -0.67
MSH5-212ENST00000467319 WDR37Q9Y2I8 494 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 UTP11Q9Y3A2 253 aaKnown RBP10.84□□□□□ -0.67
MSH5-212ENST00000467319 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 IGF2RP11717 2491 aa10.84□□□□□ -0.67
MSH5-212ENST00000467319 A0A1W2PQM1 296 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CTAGE15A4D2H0 777 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 LILRA5A6NI73 299 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 PDZK1P1A8MUH7 402 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 D6RAR5 112 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 PPM1DO15297 605 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 SNX2O60749 519 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 FTH1P02794 183 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CTAGE8P0CG41 777 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 PBLDP30039 288 aaPredicted RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 PPARGP37231 505 aaPredicted RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 ELK3P41970 407 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 SLC1A2P43004 574 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 GPR3P46089 330 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CLDN6P56747 220 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CAV1Q03135 178 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 FOXC1Q12948 553 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 RPA4Q13156 261 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 TRADDQ15628 312 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 SEPT7Q16181 437 aaKnown RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 CTSL3PQ5NE16 218 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 HES3Q5TGS1 186 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 UNC5AQ6ZN44 842 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CTAGE6Q86UF2 777 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 LRRC6Q86X45 466 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CCNJLQ8IV13 435 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CTAGE4Q8IX94 777 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 UNC5BQ8IZJ1 945 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CHCHD4Q8N4Q1 142 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 WDR48Q8TAF3 677 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 FBXO25Q8TCJ0 367 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 LKAAEAR1Q8TD35 194 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 BIRC8Q96P09 236 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CCM2Q9BSQ5 444 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 FAM167BQ9BTA0 163 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 OR52A5Q9H2C5 316 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 UCK1Q9HA47 277 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 EPB41L5Q9HCM4 733 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 ZDHHC18Q9NUE0 388 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 POT1Q9NUX5 634 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 INTS10Q9NVR2 710 aaKnown RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CPNE7Q9UBL6 633 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 ZC3H7BQ9UGR2 993 aaKnown RBP10.83□□□□□ -0.68
MSH5-212ENST00000467319 KLK13Q9UKR3 277 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 ACSL5Q9ULC5 683 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 CHMP2BQ9UQN3 213 aa10.83□□□□□ -0.68
MSH5-212ENST00000467319 ESYT3A0FGR9 886 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 SLC5A10A0PJK1 596 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 OR52A4PA6NMU1 304 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 EIF3HO15372 352 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSH5-212ENST00000467319 TCEA3O75764 348 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 S1PR4O95977 384 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 ESR1P03372 595 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 OR56A5P0C7T3 313 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 MTHFD1P11586 935 aaKnown RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 XRCC1P18887 633 aaPredicted RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 RPL10P27635 214 aaKnown RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 SLC19A1P41440 591 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 FOXK2Q01167 660 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 SLC7A5Q01650 507 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 HHEXQ03014 270 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 PDIA2Q13087 525 aaKnown RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 CLCA4Q14CN2 919 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 CCDC157Q569K6 752 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 CAPRIN2Q6IMN6 1127 aaKnown RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 PDZD3Q86UT5 571 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 KCNMB4Q86W47 210 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 TMPRSS12Q86WS5 348 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 DENND6AQ8IWF6 608 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 GALNT15Q8N3T1 639 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 OTUD6BQ8N6M0 293 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 CEP112Q8N8E3 955 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 CERS2Q96G23 380 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 FAM129AQ9BZQ8 928 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 WWP1Q9H0M0 922 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 C20orf96Q9NUD7 363 aaPredicted RBP10.82□□□□□ -0.68
MSH5-212ENST00000467319 CDYLQ9Y232 598 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 NEUROG3Q9Y4Z2 214 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 ACACBO00763 2458 aa10.82□□□□□ -0.68
MSH5-212ENST00000467319 IGHV1OR21-1A0A087WYE8 117 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms